RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 PPP3CCP48454 512 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 MAPKAPK2P49137 400 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 SLC11A2P49281 568 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 CHN2P52757 468 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 TBL3Q12788 808 aaKnown RBP13.92□□□□□ -0.18
RNF43-202ENST00000577625 SPIDRQ14159 915 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 FRG1Q14331 258 aaKnown RBP13.92□□□□□ -0.18
RNF43-202ENST00000577625 TRIM67Q6ZTA4 783 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 DENND1CQ8IV53 801 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 CROCCP3Q8IVE0 287 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 UNC5BQ8IZJ1 945 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
RNF43-202ENST00000577625 TCP10LQ8TDR4 215 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 WBP2Q969T9 261 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 APOPT1Q96IL0 206 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 FAM161BQ96MY7 647 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 KLF6Q99612 283 aaPredicted RBP13.92□□□□□ -0.18
RNF43-202ENST00000577625 APOL2Q9BQE5 337 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 KLF16Q9BXK1 252 aaPredicted RBP13.92□□□□□ -0.18
RNF43-202ENST00000577625 IL21Q9HBE4 155 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 TRPV5Q9NQA5 729 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 DDX18Q9NVP1 670 aaKnown RBP13.92□□□□□ -0.18
RNF43-202ENST00000577625 GRID1Q9ULK0 1009 aa13.92□□□□□ -0.18
RNF43-202ENST00000577625 HELZP42694 1942 aaKnown RBP13.91□□□□□ -0.18
RNF43-202ENST00000577625 MAGEB16A2A368 324 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 E9PBE3 544 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 RAMP2O60895 175 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 FKBP6O75344 327 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 PDE5AO76074 875 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 MT-CYBP00156 380 aaPredicted RBP13.91□□□□□ -0.18
RNF43-202ENST00000577625 F11P03951 625 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 OR1E1P30953 314 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 CORO1AP31146 461 aaKnown RBP13.91□□□□□ -0.18
RNF43-202ENST00000577625 GEMP55040 296 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 ACTR3P61158 418 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 PARP15Q460N3 678 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 PDCD4Q53EL6 469 aaKnown RBP13.91□□□□□ -0.18
RNF43-202ENST00000577625 TMCO4Q5TGY1 634 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 TMEM53Q6P2H8 277 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 KLHL35Q6PF15 583 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 LVRNQ6Q4G3 990 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 CFAP52Q8N1V2 620 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 BBS5Q8N3I7 341 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 ZNF75CPQ92670 426 aaPredicted RBP13.91□□□□□ -0.18
RNF43-202ENST00000577625 CERS2Q96G23 380 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 TUBA8Q9NY65 449 aaPredicted RBP13.91□□□□□ -0.18
RNF43-202ENST00000577625 HEY2Q9UBP5 337 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 DMTF1Q9Y222 760 aa13.91□□□□□ -0.18
RNF43-202ENST00000577625 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.9□□□□□ -0.18
RNF43-202ENST00000577625 FAM237BA0A1B0GVD1 139 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 LCHNA4D1U4 455 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 BOLA2-SMG1P6H3BVE0 249 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 LPXNO60711 386 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 BAG2O95816 211 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 IRF1P10914 325 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 RENBPP51606 427 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 YBEYP58557 167 aaPredicted RBP13.9□□□□□ -0.18
RNF43-202ENST00000577625 SERINC3Q13530 473 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 POLD3Q15054 466 aaPredicted RBP13.9□□□□□ -0.18
RNF43-202ENST00000577625 CERCAMQ5T4B2 595 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 PSRC1Q6PGN9 363 aaPredicted RBP13.9□□□□□ -0.18
RNF43-202ENST00000577625 HERC6Q8IVU3 1022 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 ARL10Q8N8L6 244 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 CEP70Q8NHQ1 597 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 ZFRQ96KR1 1074 aaKnown RBP13.9□□□□□ -0.18
RNF43-202ENST00000577625 TTC1Q99614 292 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 TBL1YQ9BQ87 522 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 RETREG1Q9H6L5 497 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 SP110Q9HB58 689 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 ARHGAP10A1A4S6 786 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 HMX2A2RU54 273 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 H3BNC9 293 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 RFPL1O75677 317 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 ACVRL1P37023 503 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 SLC10A7Q0GE19 358 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 SEPT7Q16181 437 aaKnown RBP13.9□□□□□ -0.18
RNF43-202ENST00000577625 ANKRD20A4Q4UJ75 823 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 FAM91A1Q658Y4 838 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 LILRA6Q6PI73 481 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 TIFABQ6ZNK6 161 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 Q6ZNX1 250 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 RIPOR1Q6ZS17 1223 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 RAPH1Q70E73 1250 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 ITIH5Q86UX2 942 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.9□□□□□ -0.18
RNF43-202ENST00000577625 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.9□□□□□ -0.18
RNF43-202ENST00000577625 SKA1Q96BD8 255 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 ZNF669Q96BR6 464 aaPredicted RBP13.9□□□□□ -0.18
RNF43-202ENST00000577625 FCRL3Q96P31 734 aaPredicted RBP13.9□□□□□ -0.18
RNF43-202ENST00000577625 KLHL5Q96PQ7 755 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 SLC22A12Q96S37 553 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 RAD9AQ99638 391 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 MCOLN1Q9GZU1 580 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 RBM38Q9H0Z9 239 aaKnown RBP13.9□□□□□ -0.18
RNF43-202ENST00000577625 MKS1Q9NXB0 559 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 SOX13Q9UN79 622 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 ZFP37Q9Y6Q3 630 aaPredicted RBP13.9□□□□□ -0.18
RNF43-202ENST00000577625 GBF1Q92538 1859 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 CHD7Q9P2D1 2997 aa13.9□□□□□ -0.18
RNF43-202ENST00000577625 ZCWPW2A0A1B0GU75 182 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms