RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 EIF3CQ99613 913 aaKnown RBP11.98□□□□□ -0.49
LITAF-219ENST00000576334 CHP1Q99653 195 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 CLPBQ9H078 707 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 IP6K2Q9UHH9 426 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 ATP8A1Q9Y2Q0 1164 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 PCDHGC4Q9Y5F7 938 aa11.98□□□□□ -0.49
LITAF-219ENST00000576334 TMEM110-MUSTN1A8MSY1 372 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 TRAFD1O14545 582 aaPredicted RBP11.97□□□□□ -0.49
LITAF-219ENST00000576334 MFSD11O43934 449 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 PCCBP05166 539 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 CSNK1DP48730 415 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 ARSEP51690 589 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 THOP1P52888 689 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 ADKP55263 362 aaKnown RBP11.97□□□□□ -0.49
LITAF-219ENST00000576334 HNRNPKP61978 463 aaKnown RBP eCLIP11.97□□□□□ -0.496e-8■□□□□ 11.1
LITAF-219ENST00000576334 BCL2L1Q07817 233 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 IHHQ14623 411 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 INPP5AQ14642 412 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 ACAP1Q15027 740 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 LRRC14Q15048 493 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 CDKN3Q16667 212 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 ASTE1Q2TB18 679 aaPredicted RBP11.97□□□□□ -0.49
LITAF-219ENST00000576334 PRRT3Q5FWE3 981 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 CFAP58Q5T655 872 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 RD3Q7Z3Z2 195 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 TMPRSS12Q86WS5 348 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 DCP2Q8IU60 420 aaKnown RBP11.97□□□□□ -0.49
LITAF-219ENST00000576334 PHACTR4Q8IZ21 702 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 NIPA2Q8N8Q9 360 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 HNRNPLLQ8WVV9 542 aaKnown RBP11.97□□□□□ -0.49
LITAF-219ENST00000576334 TEKT4Q8WW24 435 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 ECHDC3Q96DC8 303 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 IFT43Q96FT9 208 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 CRELD1Q96HD1 420 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 ZNF641Q96N77 438 aaPredicted RBP11.97□□□□□ -0.49
LITAF-219ENST00000576334 PSKH2Q96QS6 385 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 LRRC61Q9BV99 259 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 ATP13A3Q9H7F0 1226 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 NOD2Q9HC29 1040 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 NLGN3Q9NZ94 848 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 PCDHB1Q9Y5F3 818 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 ADAMTS20P59510 1910 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 COL27A1Q8IZC6 1860 aaPredicted RBP11.97□□□□□ -0.49
LITAF-219ENST00000576334 ACACAQ13085 2346 aa11.97□□□□□ -0.49
LITAF-219ENST00000576334 MYO1FO00160 1098 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 AQP9O43315 295 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 LZTS3O60299 673 aaPredicted RBP11.96□□□□□ -0.49
LITAF-219ENST00000576334 C1SP09871 688 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 CKMT1AP12532 417 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 TSHRP16473 764 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 CR2P20023 1033 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 SERPINA4P29622 427 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 HNRNPH3P31942 346 aaKnown RBP11.96□□□□□ -0.49
LITAF-219ENST00000576334 ELP6Q0PNE2 266 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 TRAF2Q12933 501 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 DPYSL3Q14195 570 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 KRT81Q14533 505 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 ALG11Q2TAA5 492 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 FAXCQ5TGI0 409 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 TMCO4Q5TGY1 634 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 GUSBP11Q6P575 273 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 BRAT1Q6PJG6 821 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 LIPIQ6XZB0 460 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 HID1Q8IV36 788 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 SFTPA2Q8IWL1 248 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 PDCD7Q8N8D1 485 aaKnown RBP11.96□□□□□ -0.49
LITAF-219ENST00000576334 PCDH19Q8TAB3 1148 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 FAM174AQ8TBP5 190 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 PDCD6IPQ8WUM4 868 aaKnown RBP11.96□□□□□ -0.49
LITAF-219ENST00000576334 TUBGCP5Q96RT8 1024 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 APOOQ9BUR5 198 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 SPTLC3Q9NUV7 552 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 DONSONQ9NYP3 566 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 CTTNBP2NLQ9P2B4 639 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 B4GALT6Q9UBX8 382 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 SEPT3Q9UH03 358 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 APOBEC3BQ9UH17 382 aaKnown RBP11.96□□□□□ -0.49
LITAF-219ENST00000576334 GPSM3Q9Y4H4 160 aa11.96□□□□□ -0.49
LITAF-219ENST00000576334 RP1P56715 2156 aa11.96□□□□□ -0.5
LITAF-219ENST00000576334 CPED1A4D0V7 1026 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 OPA1O60313 960 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 RECQL5O94762 991 aaPredicted RBP11.95□□□□□ -0.5
LITAF-219ENST00000576334 PROSCO94903 275 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 MT-CO3P00414 261 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 HOXB3P14651 431 aaPredicted RBP11.95□□□□□ -0.5
LITAF-219ENST00000576334 TGM2P21980 687 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 NSUN2Q08J23 767 aaKnown RBP eCLIP11.95□□□□□ -0.5
LITAF-219ENST00000576334 ZNF235Q14590 738 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 RFTN1Q14699 578 aaPredicted RBP11.95□□□□□ -0.5
LITAF-219ENST00000576334 GRM3Q14832 879 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 SLC18A3Q16572 532 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 COL28A1Q2UY09 1125 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 PERM1Q5SV97 790 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 DENND2CQ68D51 928 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 NCBP2-AS2Q69YL0 99 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 SPECC1LQ69YQ0 1117 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 ERAP2Q6P179 960 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 ENPP7Q6UWV6 458 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 MACC1Q6ZN28 852 aa11.95□□□□□ -0.5
LITAF-219ENST00000576334 RFLNAQ6ZTI6 216 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms