RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 PCDH12Q9NPG4 1184 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 TRMT1Q9NXH9 659 aaKnown RBP15.32■□□□□ 0.04
LITAF-217ENST00000575426 ZFR2Q9UPR6 939 aaKnown RBP15.32■□□□□ 0.04
LITAF-217ENST00000575426 ITM2BQ9Y287 266 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 PCDHB9Q9Y5E1 797 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 RAI2Q9Y5P3 530 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 IGLON5A6NGN9 336 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 ARHGAP33O14559 1287 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 KCNK3O14649 394 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 MAGEC1O60732 1142 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 TM7SF2O76062 418 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 PAK4O96013 591 aaPredicted RBP15.31■□□□□ 0.04
LITAF-217ENST00000575426 RBP3P10745 1247 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 CYP2A6P11509 494 aaPredicted RBP15.31■□□□□ 0.04
LITAF-217ENST00000575426 ENGP17813 658 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 ITIH2P19823 946 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 SDHBP21912 280 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 HNRNPA2B1P22626 353 aaKnown RBP15.31■□□□□ 0.04
LITAF-217ENST00000575426 PTPN3P26045 913 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 CD86P42081 329 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 GRIA4P48058 902 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 TRAF2Q12933 501 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 TMEM52BQ4KMG9 183 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 TMEM259Q4ZIN3 620 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 SEL1L3Q68CR1 1132 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 PID1Q7Z2X4 250 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 REXO1L1PQ8IX06 675 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 C1orf216Q8TAB5 229 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 ARRDC2Q8TBH0 407 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 SLC6A18Q96N87 628 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 HERPUD2Q9BSE4 406 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 WRAP53Q9BUR4 548 aaKnown RBP15.31■□□□□ 0.04
LITAF-217ENST00000575426 CARD9Q9H257 536 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 EBF2Q9HAK2 575 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 GLOD4Q9HC38 313 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 CAPN10Q9HC96 672 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 KLHL8Q9P2G9 620 aaPredicted RBP15.31■□□□□ 0.04
LITAF-217ENST00000575426 GGT7Q9UJ14 662 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 TRHDEQ9UKU6 1024 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 USP34Q70CQ2 3546 aa15.31■□□□□ 0.04
LITAF-217ENST00000575426 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.3■□□□□ 0.04
LITAF-217ENST00000575426 A0A1B0GVT2 93 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 LNP1A1A4G5 178 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 C10orf142B7Z368 130 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 KIF5CO60282 957 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 LZTS3O60299 673 aaPredicted RBP15.3■□□□□ 0.04
LITAF-217ENST00000575426 MMP20O60882 483 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 PGLSO95336 258 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 PRKCGP05129 697 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 PRLRP16471 622 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 RBL1P28749 1068 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 TNNT3P45378 269 aaPredicted RBP15.3■□□□□ 0.04
LITAF-217ENST00000575426 NIPAL4Q0D2K0 466 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 ZNF569Q5MCW4 686 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 CCDC70Q6NSX1 233 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 IL27RAQ6UWB1 636 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 ZSWIM9Q86XI8 627 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 CNTD1Q8N815 330 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 FAM174AQ8TBP5 190 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 ASB12Q8WXK4 309 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 TEKT5Q96M29 485 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 NSMCE3Q96MG7 304 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 PCDH15Q96QU1 1955 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 MYOCQ99972 504 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 ORAI3Q9BRQ5 295 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 C1QTNF2Q9BXJ5 285 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 SLC25A51Q9H1U9 297 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 PCDH9Q9HC56 1237 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 TMEM9BQ9NQ34 198 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 CHKBQ9Y259 395 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 JRKLQ9Y4A0 524 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 DMDP11532 3685 aa15.3■□□□□ 0.04
LITAF-217ENST00000575426 TDRD6O60522 2096 aaKnown RBP15.29■□□□□ 0.04
LITAF-217ENST00000575426 FPGTO14772 594 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 VILLO15195 856 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 ELFN1P0C7U0 828 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 LIG3P49916 1009 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 WASHC5Q12768 1159 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 GRIK2Q13002 908 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 USP45Q70EL2 814 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 DPPA4Q7L190 304 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 SLC13A5Q86YT5 568 aaPredicted RBP15.29■□□□□ 0.04
LITAF-217ENST00000575426 MFSD2AQ8NA29 543 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 NETO1Q8TDF5 533 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 MAIP1Q8WWC4 291 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 SPOCK2Q92563 424 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 IFT43Q96FT9 208 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 IMP4Q96G21 291 aaKnown RBP15.29■□□□□ 0.04
LITAF-217ENST00000575426 KLHDC7BQ96G42 594 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 RBM15Q96T37 977 aaKnown RBP eCLIP15.29■□□□□ 0.04
LITAF-217ENST00000575426 FAM118BQ9BPY3 351 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 TDRD1Q9BXT4 1180 aaKnown RBP15.29■□□□□ 0.04
LITAF-217ENST00000575426 ADGRE3Q9BY15 652 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 FSCN3Q9NQT6 498 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 CDV3Q9UKY7 258 aaKnown RBP15.29■□□□□ 0.04
LITAF-217ENST00000575426 ANKRD6Q9Y2G4 727 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 HS3ST3A1Q9Y663 406 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 SLCO1B1Q9Y6L6 691 aa15.29■□□□□ 0.04
LITAF-217ENST00000575426 CFAP69A5D8W1 941 aa15.28■□□□□ 0.04
LITAF-217ENST00000575426 A8MX80 341 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms