RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 LIG3P49916 1009 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 BLKP51451 505 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 MAMLD1Q13495 774 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 GRM3Q14832 879 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 STX1AQ16623 288 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 CA9Q16790 459 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 ALG11Q2TAA5 492 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 CFAP58Q5T655 872 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 ARHGAP40Q5TG30 622 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 ERAP2Q6P179 960 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 SRLQ86TD4 932 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 ZSWIM9Q86XI8 627 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 FSTL5Q8N475 847 aaPredicted RBP15.34■□□□□ 0.05
CTNS-209ENST00000574776 LSM14AQ8ND56 463 aaKnown RBP15.34■□□□□ 0.05
CTNS-209ENST00000574776 SCG3Q8WXD2 468 aaKnown RBP15.34■□□□□ 0.05
CTNS-209ENST00000574776 NAT6Q93015 286 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 PRR11Q96HE9 360 aaPredicted RBP15.34■□□□□ 0.05
CTNS-209ENST00000574776 ZNF641Q96N77 438 aaPredicted RBP15.34■□□□□ 0.05
CTNS-209ENST00000574776 CCDC3Q9BQI4 270 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 EDEM3Q9BZQ6 932 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 SYNDIG1Q9H7V2 258 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 DONSONQ9NYP3 566 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 SIRPGQ9P1W8 387 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 PCSK1NQ9UHG2 260 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 AP4E1Q9UPM8 1137 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 OR1A2Q9Y585 309 aa15.34■□□□□ 0.05
CTNS-209ENST00000574776 ARHGAP42A6NI28 874 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 EEF2KO00418 725 aaKnown RBP15.33■□□□□ 0.04
CTNS-209ENST00000574776 TEX33O43247 280 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 DAPK3O43293 454 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 TCEA3O75764 348 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 PALMO75781 387 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 RASGRP1O95267 797 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 ATP1A3P13637 1013 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 HTR1BP28222 390 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 HTR7P34969 479 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 RGRP47804 291 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 TMPRSS3P57727 454 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 ELOCQ15369 112 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 ERMARDQ5T6L9 678 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 BRAT1Q6PJG6 821 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 PCSK4Q6UW60 755 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 ARFGAP1Q8N6T3 406 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 TSEN2Q8NCE0 465 aaKnown RBP15.33■□□□□ 0.04
CTNS-209ENST00000574776 SYT11Q9BT88 431 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 DPH1Q9BZG8 443 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 PARVAQ9NVD7 372 aa15.33■□□□□ 0.04
CTNS-209ENST00000574776 ATMINO43313 823 aaPredicted RBP15.32■□□□□ 0.04
CTNS-209ENST00000574776 PCCBP05166 539 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 ALPIP09923 528 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 CSNK1DP48730 415 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 SRP54P61011 504 aaKnown RBP15.32■□□□□ 0.04
CTNS-209ENST00000574776 SPIDRQ14159 915 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 NFATC4Q14934 902 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 PLEKHA7Q6IQ23 1121 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 LVRNQ6Q4G3 990 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 IGF2-ASQ6U949 168 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 ARL10Q8N8L6 244 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 PLA2G15Q8NCC3 412 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 PCDH19Q8TAB3 1148 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 WDR48Q8TAF3 677 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 TUBGCP5Q96RT8 1024 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 PEBP4Q96S96 227 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 KCTD15Q96SI1 283 aaPredicted RBP15.32■□□□□ 0.04
CTNS-209ENST00000574776 ATP13A3Q9H7F0 1226 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 RABGEF1Q9UJ41 708 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 GPR34Q9UPC5 381 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 ATP8A1Q9Y2Q0 1164 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 PCDHGA8Q9Y5G5 932 aa15.32■□□□□ 0.04
CTNS-209ENST00000574776 TMEM191CA6NGB0 347 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 A8MX80 341 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 DFFAO00273 331 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 TNFSF15O95150 251 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 TNFP01375 233 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 ERCC2P18074 760 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 SERPINA4P29622 427 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 MMP12P39900 470 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 UCNP55089 124 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 CCL7P80098 99 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 AGERQ15109 404 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 PPP6R3Q5H9R7 873 aaPredicted RBP15.31■□□□□ 0.04
CTNS-209ENST00000574776 AFMIDQ63HM1 303 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 KCTD16Q68DU8 428 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 ARHGAP36Q6ZRI8 547 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 RFX8Q6ZV50 586 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 GKN2Q86XP6 184 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 ARHGAP12Q8IWW6 846 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 AOPEPQ8N6M6 819 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 PAF1Q8N7H5 531 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 KYQ8NBH2 561 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 WDR36Q8NI36 951 aaKnown RBP15.31■□□□□ 0.04
CTNS-209ENST00000574776 CCDC74AQ96AQ1 378 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 WDR92Q96MX6 357 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 GBP4Q96PP9 640 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 SNRNP25Q9BV90 132 aaKnown RBP15.31■□□□□ 0.04
CTNS-209ENST00000574776 CINPQ9BW66 212 aaPredicted RBP15.31■□□□□ 0.04
CTNS-209ENST00000574776 TRIM7Q9C029 511 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 KLQ9UEF7 1012 aa15.31■□□□□ 0.04
CTNS-209ENST00000574776 CFAP46Q8IYW2 2715 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 CCDC187A0A096LP49 1063 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms