RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 FOXJ1Q92949 421 aa13□□□□□ -0.33
NPLOC4-214ENST00000573876 SLCO2A1Q92959 643 aa13□□□□□ -0.33
NPLOC4-214ENST00000573876 PPP1R2P1Q96PQ5 205 aa13□□□□□ -0.33
NPLOC4-214ENST00000573876 PCED1AQ9H1Q7 454 aa13□□□□□ -0.33
NPLOC4-214ENST00000573876 KDM4CQ9H3R0 1056 aa13□□□□□ -0.33
NPLOC4-214ENST00000573876 PCDH9Q9HC56 1237 aa13□□□□□ -0.33
NPLOC4-214ENST00000573876 RRAGDQ9NQL2 400 aaPredicted RBP13□□□□□ -0.33
NPLOC4-214ENST00000573876 FAM86C1Q9NVL1 165 aa13□□□□□ -0.33
NPLOC4-214ENST00000573876 SERGEFQ9UGK8 458 aa13□□□□□ -0.33
NPLOC4-214ENST00000573876 FAM153AQ9UHL3 310 aa13□□□□□ -0.33
NPLOC4-214ENST00000573876 MBD1Q9UIS9 605 aaPredicted RBP13□□□□□ -0.33
NPLOC4-214ENST00000573876 AAR2Q9Y312 384 aaKnown RBP13□□□□□ -0.33
NPLOC4-214ENST00000573876 RAI2Q9Y5P3 530 aa13□□□□□ -0.33
NPLOC4-214ENST00000573876 FANCMQ8IYD8 2048 aa13□□□□□ -0.33
NPLOC4-214ENST00000573876 PTPRZ1P23471 2315 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 KNL1Q8NG31 2342 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TBC1D3DA0A087WVF3 549 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TBC1D3IA0A087WXS9 549 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TBC1D3EA0A087X179 549 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TBC1D3KA0A087X1G2 549 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TSPAN11A1L157 253 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TBC1D3FA6NER0 549 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 FAM187AA6NFU0 413 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 UPK3BL1B0FP48 263 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TBC1D3LB9A6J9 549 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 UPK3BL2E5RIL1 263 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 E7EVH7 732 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 PSMD3O43242 534 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 HTRA2O43464 458 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 CPP00450 1065 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TBC1D3HP0C7X1 549 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TIMP2P16035 220 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 ACSL1P33121 698 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 LMAN1P49257 510 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 DHPSP49366 369 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 EPHB1P54762 984 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 ADPRHP54922 357 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 GEMP55040 296 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 SLC7A5Q01650 507 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 ELP6Q0PNE2 266 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 PTK6Q13882 451 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 SPARCL1Q14515 664 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 SLC14A2Q15849 920 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 PIP5KL1Q5T9C9 394 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TBC1D3GQ6DHY5 549 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TBC1D3CQ6IPX1 549 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TBC1D3Q8IZP1 549 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 FRMD1Q8N878 549 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 CADM4Q8NFZ8 388 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 VOPP1Q96AW1 172 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 LRRC45Q96CN5 670 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 OXNAD1Q96HP4 312 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 GORASP1Q9BQQ3 440 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TRIM51Q9BSJ1 452 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TRIM31Q9BZY9 425 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 EPC1Q9H2F5 836 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 PREBQ9HCU5 417 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 ASIC3Q9UHC3 531 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 TPX2Q9ULW0 747 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 CHKBQ9Y259 395 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 ARIH1Q9Y4X5 557 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 PCDHB9Q9Y5E1 797 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 EML5Q05BV3 1969 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 THADAQ6YHU6 1953 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 PLXND1Q9Y4D7 1925 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 VPS13AQ96RL7 3174 aa12.99□□□□□ -0.33
NPLOC4-214ENST00000573876 PIEZO1Q92508 2521 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 GOLGA6CA6NDK9 693 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 GOLGA6BA6NDN3 693 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 PRR23AA6NEV1 266 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 MEI4A8MW99 385 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 EFCAB8A8MWE9 144 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 TRAFD1O14545 582 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 PLRG1O43660 514 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 AP1G1O43747 822 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 PCDH8O95206 1070 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 PGLSO95336 258 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 AGTP01019 485 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 PDHA1P08559 390 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 GOLGA6DP0CG33 693 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 NBL1P41271 181 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 WNT3AP56704 352 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 BASP1P80723 227 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 CDK18Q07002 472 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 TRAF2Q12933 501 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 MPP3Q13368 585 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 UGP2Q16851 508 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 WDR45BQ5MNZ6 344 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 PMS2CLQ68D20 193 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 CCDC70Q6NSX1 233 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 C8orf74Q6P047 294 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 NEK5Q6P3R8 708 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 TMEFF1Q8IYR6 380 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 LRRN4CLQ8ND94 238 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 IPMKQ8NFU5 416 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 CCHCR1Q8TD31 782 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 FAM131CQ96AQ9 280 aa12.98□□□□□ -0.33
NPLOC4-214ENST00000573876 TADA1Q96BN2 335 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms