RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CBFA2T3O75081 653 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 PCDH8O95206 1070 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 POP4O95707 220 aaKnown RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 TOP3BO95985 862 aaKnown RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 SERPING1P05155 500 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 MYBL1P10243 752 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 SPINK2P20155 84 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 HTR7P34969 479 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 CCNHP51946 323 aaPredicted RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 SNRPD1P62314 119 aaKnown RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 PPP2CBP62714 309 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 PPP2CAP67775 309 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 ZBED6P86452 979 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 NFKBIBQ15653 356 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 MYLK3Q32MK0 819 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 PARP15Q460N3 678 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 SETMARQ53H47 684 aaPredicted RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 INO80DQ53TQ3 878 aaPredicted RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 TDRD12Q587J7 1177 aaKnown RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 HGSNATQ68CP4 663 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 FBXL19Q6PCT2 694 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 VPS36Q86VN1 386 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 IQCHQ86VS3 1027 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 UMODL1-AS1Q8N2C9 162 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 ARFGAP1Q8N6T3 406 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 OR2AP1Q8NGE2 309 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 FNIP1Q8TF40 1166 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 CASKIN2Q8WXE0 1202 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 ZNF653Q96CK0 615 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 LRIG1Q96JA1 1093 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 FEM1CQ96JP0 617 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 ELF4Q99607 663 aaPredicted RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 EIF3CQ99613 913 aaKnown RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 CDC6Q99741 560 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 NCAPGQ9BPX3 1015 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 SCNM1Q9BWG6 230 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 TM6SF2Q9BZW4 377 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 DHX35Q9H5Z1 703 aaKnown RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 NOL6Q9H6R4 1146 aaKnown RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 ZDHHC6Q9H6R6 413 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 GDF3Q9NR23 364 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 GPATCH2LQ9NWQ4 482 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 IFNKQ9P0W0 207 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 PCSK1NQ9UHG2 260 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 SALL4Q9UJQ4 1053 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 AP4E1Q9UPM8 1137 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 WASF3Q9UPY6 502 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 NEU3Q9UQ49 428 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 LUC7L2Q9Y383 392 aaKnown RBP7.55□□□□□ -1.2
NUP88-205ENST00000572809 SCINQ9Y6U3 715 aa7.55□□□□□ -1.2
NUP88-205ENST00000572809 LAMA1P25391 3075 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 A0A1W2PQU0 124 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 C16orf96A6NNT2 1141 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 EEF2KO00418 725 aaKnown RBP7.54□□□□□ -1.2
NUP88-205ENST00000572809 KRIT1O00522 736 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 FGF10O15520 208 aaPredicted RBP7.54□□□□□ -1.2
NUP88-205ENST00000572809 HYAL3O43820 417 aaPredicted RBP7.54□□□□□ -1.2
NUP88-205ENST00000572809 PRPSAP2O60256 369 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 MAP3K6O95382 1288 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 PAK4O96013 591 aaPredicted RBP7.54□□□□□ -1.2
NUP88-205ENST00000572809 GSRP00390 522 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 TPM3P06753 285 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 FTH1P19P0C7X4 201 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 ADRB3P13945 408 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 MIPP30301 263 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 GSTT1P30711 240 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 CASP14P31944 242 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 GKP32189 559 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 SOX18P35713 384 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 GRK6P43250 576 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 HCAR3P49019 387 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 CCT8P50990 548 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 NEK3P51956 506 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 NDST2P52849 883 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 TPI1P60174 286 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 IL9RQ01113 521 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 PLAURQ03405 335 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 RAD51Q06609 339 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 OVGP1Q12889 678 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 HYAL2Q12891 473 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 BNIP3Q12983 259 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 SERINC3Q13530 473 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 ACAP1Q15027 740 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 CYTH1Q15438 398 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 CA9Q16790 459 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 ZNF805Q5CZA5 627 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 GLRX5Q86SX6 157 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 TTC7BQ86TV6 843 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 SLCO6A1Q86UG4 719 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 HORMAD1Q86X24 394 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 PSTKQ8IV42 348 aaKnown RBP7.54□□□□□ -1.2
NUP88-205ENST00000572809 CHCHD4Q8N4Q1 142 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 PNPLA1Q8N8W4 532 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 KLK6Q92876 244 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 HMCESQ96FZ2 354 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 KLHDC7BQ96G42 594 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 KLHL32Q96NJ5 620 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 SNRNP25Q9BV90 132 aaKnown RBP7.54□□□□□ -1.2
NUP88-205ENST00000572809 TRIM7Q9C029 511 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 TGIF2Q9GZN2 237 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms