RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 LRRC49Q8IUZ0 686 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 TMEM139Q8IV31 216 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 RHOT1Q8IXI2 618 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 HCAR2Q8TDS4 363 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 ASB12Q8WXK4 309 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 CENPTQ96BT3 561 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 FAF2Q96CS3 445 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 ECHDC3Q96DC8 303 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 LENG8Q96PV6 779 aaPredicted RBP14.66□□□□□ -0.06
LITAF-208ENST00000571627 MGME1Q9BQP7 344 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 NOD2Q9HC29 1040 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 NT5MQ9NPB1 228 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 MBNL1Q9NR56 388 aaKnown RBP14.66□□□□□ -0.06
LITAF-208ENST00000571627 GPR27Q9NS67 375 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 UCKL1Q9NWZ5 548 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 DNAJC28Q9NX36 388 aa14.66□□□□□ -0.06
LITAF-208ENST00000571627 DDX56Q9NY93 547 aaKnown RBP14.66□□□□□ -0.06
LITAF-208ENST00000571627 GOLGA4Q13439 2230 aaKnown RBP14.65□□□□□ -0.06
LITAF-208ENST00000571627 BTNL10A8MVZ5 291 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 A8MX80 341 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 ZNF487B1APH4 448 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 TRAFD1O14545 582 aaPredicted RBP14.65□□□□□ -0.06
LITAF-208ENST00000571627 C6P13671 934 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 CR2P20023 1033 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 KDELR1P24390 212 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 RABIFP47224 123 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 LIG3P49916 1009 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 SUOXP51687 545 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 VAV2P52735 878 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 SLC10A2Q12908 348 aaPredicted RBP14.65□□□□□ -0.06
LITAF-208ENST00000571627 RALGDSQ12967 914 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 DNAJC3Q13217 504 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 PDE1CQ14123 709 aaPredicted RBP14.65□□□□□ -0.06
LITAF-208ENST00000571627 IRF4Q15306 451 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 ODF2Q5BJF6 829 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 MARC1Q5VT66 337 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 ERAP2Q6P179 960 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.65□□□□□ -0.06
LITAF-208ENST00000571627 TP53I13Q8NBR0 393 aaPredicted RBP14.65□□□□□ -0.06
LITAF-208ENST00000571627 DENND6BQ8NEG7 585 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 PDCD6IPQ8WUM4 868 aaKnown RBP14.65□□□□□ -0.06
LITAF-208ENST00000571627 NSMCE1Q8WV22 266 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 ADAMTS14Q8WXS8 1223 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 CNDP2Q96KP4 475 aaKnown RBP14.65□□□□□ -0.06
LITAF-208ENST00000571627 NUDCD1Q96RS6 583 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 GOLPH3Q9H4A6 298 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 SCUBE2Q9NQ36 999 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 PCDHGC4Q9Y5F7 938 aa14.65□□□□□ -0.06
LITAF-208ENST00000571627 LRP4O75096 1905 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 C3orf70A6NLC5 250 aaPredicted RBP14.64□□□□□ -0.07
LITAF-208ENST00000571627 C1QTNF9BB2RNN3 333 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 ENC1O14682 589 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 FFAR2O15552 330 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 TRIM16O95361 564 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 LDOC1O95751 146 aaPredicted RBP14.64□□□□□ -0.07
LITAF-208ENST00000571627 KRT1P04264 644 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 C1QTNF9P0C862 333 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 COMTP21964 271 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 DGKAP23743 735 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 HSPA9P38646 679 aaKnown RBP14.64□□□□□ -0.07
LITAF-208ENST00000571627 PFN3P60673 137 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 TRAF2Q12933 501 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 C11orf63Q6NUN7 778 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 KIAA1328Q86T90 577 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 BBS5Q8N3I7 341 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 SLC25A45Q8N413 288 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 FAM174AQ8TBP5 190 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 RNF157Q96PX1 679 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 C1QTNF7Q9BXJ2 289 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 KLF15Q9UIH9 416 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 NEUROG3Q9Y4Z2 214 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 ALG6Q9Y672 507 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 ASPMQ8IZT6 3477 aa14.64□□□□□ -0.07
LITAF-208ENST00000571627 SPTY2D1-AS1A0A0U1RR47 76 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.63□□□□□ -0.07
LITAF-208ENST00000571627 GOLGA6L3A6NEY3 463 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 TRIM38O00635 465 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 PJA2O43164 708 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 PSTPIP1O43586 416 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 LZTS3O60299 673 aaPredicted RBP14.63□□□□□ -0.07
LITAF-208ENST00000571627 PIAS2O75928 621 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 DKK1O94907 266 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 THOP1P52888 689 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 ITKQ08881 620 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 LRRC14Q15048 493 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 PTPRRQ15256 657 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 IFI16Q16666 785 aaKnown RBP14.63□□□□□ -0.07
LITAF-208ENST00000571627 WSCD2Q2TBF2 565 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 FAM182AQ5T1J6 154 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 PARGQ86W56 976 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 MARCH9Q86YJ5 346 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 DCP2Q8IU60 420 aaKnown RBP14.63□□□□□ -0.07
LITAF-208ENST00000571627 TEX26Q8N6G2 289 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 PLD5Q8N7P1 536 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 ACRBPQ8NEB7 543 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 CCDC112Q8NEF3 446 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 TPCN2Q8NHX9 752 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 RNF25Q96BH1 459 aaPredicted RBP14.63□□□□□ -0.07
LITAF-208ENST00000571627 SEMA3CQ99985 751 aa14.63□□□□□ -0.07
LITAF-208ENST00000571627 MAK16Q9BXY0 300 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms