RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 AQP7O14520 342 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 TNFRSF10CO14798 259 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PPEF2O14830 753 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 LSM1O15116 133 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 EIF3DO15371 548 aaKnown RBP eCLIP3.6□□□□□ -1.83
SMG6-208ENST00000570874 CALUO43852 315 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 PEX1O43933 1283 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ACSL4O60488 711 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 STX10O60499 249 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 NDUFS2O75306 463 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 NEBLO76041 1014 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PRAMEF12O95522 483 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SLC25A27O95847 323 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SNAI1O95863 264 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 CLPTM1O96005 669 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PFKMP08237 780 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ITGA5P08648 1049 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 MYZAPP0CAP1 466 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ACRP10323 421 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CETPP11597 493 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PRPS2P11908 318 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 KRT3P12035 628 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PLS3P13797 630 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ANPEPP15144 967 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 NME1P15531 152 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 H2AFXP16104 143 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 SYN1P17600 705 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CHRM3P20309 590 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 AGXTP21549 392 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PTAFRP25105 342 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CST5P28325 142 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 ADORA2AP29274 412 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 GCH1P30793 250 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CORO1AP31146 461 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 SFNP31947 248 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 MDH1P40925 334 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 PPP1R2P41236 205 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 GRIA2P42262 883 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ARHGAP25P42331 645 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 MAGEA10P43363 369 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 SEC24CP53992 1094 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PMS2P54278 862 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 NCKAP1LP55160 1127 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 HUNKP57058 714 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 TSPAN5P62079 268 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CYP27A1Q02318 531 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 RPL6Q02878 288 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 KDSRQ06136 332 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 GFPT1Q06210 699 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.6□□□□□ -1.83
SMG6-208ENST00000570874 PTK6Q13882 451 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 GAS6Q14393 721 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CASP8Q14790 479 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 EMC2Q15006 297 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ZMYND11Q15326 602 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 RPS6KA2Q15349 733 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SEC23BQ15437 767 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 GPR68Q15743 365 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 BAK1Q16611 211 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CCL14Q16627 93 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CYP2A13Q16696 494 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 MEP1BQ16820 701 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 INSCQ1MX18 579 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 EDRF1Q3B7T1 1238 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 HSDL1Q3SXM5 330 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 HABP4Q5JVS0 413 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 PLEKHS1Q5SXH7 462 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CELF3Q5SZQ8 465 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 C1orf220Q5T0J3 134 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PPP1R26Q5T8A7 1209 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 ATAD3BQ5T9A4 648 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 RIPPLY2Q5TAB7 128 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 RASIP1Q5U651 963 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 TAPT1Q6NXT6 567 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 NOTUMQ6P988 496 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ZCCHC12Q6PEW1 402 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SEZ6L2Q6UXD5 910 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SYT10Q6XYQ8 523 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 LINC00696Q6ZRV3 163 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 HDXQ7Z353 690 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 HAUS6Q7Z4H7 955 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 TMCO2Q7Z6W1 182 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 FAM124AQ86V42 546 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 STX12Q86Y82 276 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ULK2Q8IYT8 1036 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PHACTR4Q8IZ21 702 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SYCP3Q8IZU3 236 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SCML4Q8N228 414 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SLC43A2Q8N370 569 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ZCCHC7Q8N3Z6 543 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 CHST14Q8NCH0 376 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 TMEM161BQ8NDZ6 487 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 GPRC5AQ8NFJ5 357 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 OR6J1Q8NGC5 347 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 FAM81AQ8TBF8 368 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 MYCBPAPQ8TBZ2 947 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ENKURQ8TC29 256 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 MAIP1Q8WWC4 291 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 EZH1Q92800 747 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 WNT8BQ93098 351 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms