RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 ZFATQ9P243 1243 aa11.07□□□□□ -0.64
NPLOC4-203ENST00000570300 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-203ENST00000570300 ERVW-1Q9UQF0 538 aa11.07□□□□□ -0.64
NPLOC4-203ENST00000570300 ANKRD36A6QL64 1941 aa11.07□□□□□ -0.64
NPLOC4-203ENST00000570300 KIAA1549LQ6ZVL6 1849 aa11.07□□□□□ -0.64
NPLOC4-203ENST00000570300 TTC24A2A3L6 582 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 ARNTLO00327 626 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 SHOX2O60902 331 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 PGLSO95336 258 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 CRTAMO95727 393 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 ARSAP15289 507 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 KRT15P19012 456 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 NNMTP40261 264 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 CTSOP43234 321 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 SLC18A2Q05940 514 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 GABPB1Q06547 395 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 BCL2L1Q07817 233 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 PDAP1Q13442 181 aaKnown RBP11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 RUNX3Q13761 415 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 E2F5Q15329 346 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 TMED2Q15363 201 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 TAF1AQ15573 450 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 DLG2Q15700 870 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 QPCTQ16769 361 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 UGP2Q16851 508 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 GEN1Q17RS7 908 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 SKIDA1Q1XH10 827 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 CARD16Q5EG05 197 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 ARMC12Q5T9G4 340 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 ESRP1Q6NXG1 681 aaKnown RBP11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 PACS1Q6VY07 963 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 KCNMB4Q86W47 210 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 CTAGE3PQ8IX95 158 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 SLC25A41Q8N5S1 370 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 OR13J1Q8NGT2 312 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 GPR150Q8NGU9 434 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 CALML6Q8TD86 181 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 ACMSDQ8TDX5 336 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 STYXQ8WUJ0 223 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 PIH1D2Q8WWB5 315 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 MYO19Q96H55 970 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 EXOC2Q96KP1 924 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 ZNF778Q96MU6 729 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 FAM167BQ9BTA0 163 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 APOL5Q9BWW9 433 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 MFSD1Q9H3U5 465 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 EBF3Q9H4W6 596 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 POMKQ9H5K3 350 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 TRPV5Q9NQA5 729 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 C20orf96Q9NUD7 363 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 ELOVL2Q9NXB9 296 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 DEC1Q9P2X7 70 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 TBK1Q9UHD2 729 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 CDH22Q9UJ99 828 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 CHKBQ9Y259 395 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 PCDHGC4Q9Y5F7 938 aa11.06□□□□□ -0.64
NPLOC4-203ENST00000570300 MYLKQ15746 1914 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 COL4A3Q01955 1670 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 TSPAN11A1L157 253 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 HMX2A2RU54 273 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 OTOL1A6NHN0 477 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 H7C0S8 307 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 TYROBPO43914 113 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 PDHA1P08559 390 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 ERVK-10P10266 1014 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 BRAFP15056 766 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 SERPINA4P29622 427 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 SPRP35270 261 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 STK19P49842 368 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 ZNF140P52738 457 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 CBX1P83916 185 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 RAD51Q06609 339 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 CNGA3Q16281 694 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 PTPRNQ16849 979 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 HSP90AA5PQ58FG0 334 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 ATXN7L2Q5T6C5 722 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 TRIM68Q6AZZ1 485 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 GRAMD4Q6IC98 578 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 CES3Q6UWW8 571 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 KDELC2Q7Z4H8 507 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 SUGP1Q8IWZ8 645 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 YAF2Q8IY57 180 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 UNC5BQ8IZJ1 945 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 OR2A12Q8NGT7 310 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 NXPE3Q969Y0 559 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 RPL10LQ96L21 214 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 MCCC1Q96RQ3 725 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 RBBP8Q99708 897 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 CCDC134Q9H6E4 229 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 NLE1Q9NVX2 485 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 SLCO3A1Q9UIG8 710 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 CD207Q9UJ71 328 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 SLC8A2Q9UPR5 921 aa11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 SPTBN5Q9NRC6 3674 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-203ENST00000570300 C5orf42Q9H799 3197 aa11.04□□□□□ -0.64
NPLOC4-203ENST00000570300 BPTFQ12830 3046 aa11.04□□□□□ -0.64
NPLOC4-203ENST00000570300 A0A0J9YYE9 177 aa11.04□□□□□ -0.64
NPLOC4-203ENST00000570300 FAM47DPA6NHR8 397 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms