RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.61■■□□□ 1.37
RAB40C-212ENST00000569575 MDGA1Q8NFP4 955 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 PDCD6IPQ8WUM4 868 aaKnown RBP23.61■■□□□ 1.37
RAB40C-212ENST00000569575 NSMCE3Q96MG7 304 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 HHIPQ96QV1 700 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 MCCC1Q96RQ3 725 aaPredicted RBP23.61■■□□□ 1.37
RAB40C-212ENST00000569575 PRRX2Q99811 253 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 TBL1YQ9BQ87 522 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 LRRC1Q9BTT6 524 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 PCED1AQ9H1Q7 454 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 MAGEE1Q9HCI5 957 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 XAB2Q9HCS7 855 aaKnown RBP23.61■■□□□ 1.37
RAB40C-212ENST00000569575 KCTD5Q9NXV2 234 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 UBP1Q9NZI7 540 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 SHOC2Q9UQ13 582 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 CHKBQ9Y259 395 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 A0A0J9YYE9 177 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 TTC24A2A3L6 582 aaPredicted RBP23.6■■□□□ 1.37
RAB40C-212ENST00000569575 AXIN1O15169 862 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 TSPAN6O43657 245 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 GJB3O75712 270 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 TRBC1P01850 177 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 ADRB3P13945 408 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 TIMP2P16035 220 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 DRD3P35462 400 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 TPMTP51580 245 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 CDH17Q12864 832 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 PCSK7Q16549 785 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 USP39Q53GS9 565 aaKnown RBP23.6■■□□□ 1.37
RAB40C-212ENST00000569575 NOA1Q8NC60 698 aaKnown RBP23.6■■□□□ 1.37
RAB40C-212ENST00000569575 CPT1BQ92523 772 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 RUBCNQ92622 972 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 RMDN1Q96DB5 314 aa23.6■■□□□ 1.37
RAB40C-212ENST00000569575 H0Y858 1186 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 RNASEH2AO75792 299 aaKnown RBP23.59■■□□□ 1.37
RAB40C-212ENST00000569575 SEC31AO94979 1220 aaKnown RBP23.59■■□□□ 1.37
RAB40C-212ENST00000569575 ZNF30P17039 623 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 CNR2P34972 360 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 P2RY2P41231 377 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 VPS41P49754 854 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 CNTN1Q12860 1018 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 PIP5KL1Q5T9C9 394 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 RNASEH2BQ5TBB1 312 aaKnown RBP23.59■■□□□ 1.37
RAB40C-212ENST00000569575 PARS2Q7L3T8 475 aaKnown RBP23.59■■□□□ 1.37
RAB40C-212ENST00000569575 PRUNE1Q86TP1 453 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 AADATQ8N5Z0 425 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 NAT8LQ8N9F0 302 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 GANCQ8TET4 914 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 ARRDC3Q96B67 414 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 SPACA7Q96KW9 195 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 FOXP3Q9BZS1 431 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 BTBD1Q9H0C5 482 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 PREBQ9HCU5 417 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 FAM114A2Q9NRY5 505 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 C2orf42Q9NWW7 574 aa23.59■■□□□ 1.37
RAB40C-212ENST00000569575 CACNA1IQ9P0X4 2223 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 RIOK3O14730 519 aaKnown RBP23.58■■□□□ 1.37
RAB40C-212ENST00000569575 AREL1O15033 823 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 PDHA1P08559 390 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 PDE1BQ01064 536 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 CBLBQ13191 982 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 FAXCQ5TGI0 409 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 AGBL4Q5VU57 503 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 LRRC8BQ6P9F7 803 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 SLC36A4Q6YBV0 504 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 WDR5BQ86VZ2 330 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 LONP2Q86WA8 852 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 TRIM51Q9BSJ1 452 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 FICDQ9BVA6 458 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 TSPYL1Q9H0U9 437 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 C11orf16Q9NQ32 467 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 CASS4Q9NQ75 786 aa23.58■■□□□ 1.37
RAB40C-212ENST00000569575 A0A1W2PP55 124 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 LRRC72A6NJI9 287 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 PSMD11O00231 422 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 PLRG1O43660 514 aaKnown RBP23.57■■□□□ 1.36
RAB40C-212ENST00000569575 HEXIM1O94992 359 aaKnown RBP23.57■■□□□ 1.36
RAB40C-212ENST00000569575 ATXN1LP0C7T5 689 aaKnown RBP23.57■■□□□ 1.36
RAB40C-212ENST00000569575 TDGF1P13385 188 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 NUDT1P36639 197 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 NPY2RP49146 381 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 QPCTQ16769 361 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 TMEM52BQ4KMG9 183 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 SIRPB2Q5JXA9 342 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 IZUMO3Q5VZ72 239 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 HIBCHQ6NVY1 386 aaPredicted RBP23.57■■□□□ 1.36
RAB40C-212ENST00000569575 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.57■■□□□ 1.36
RAB40C-212ENST00000569575 CEP128Q6ZU80 1094 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 EIF1ADQ8N9N8 165 aaKnown RBP23.57■■□□□ 1.36
RAB40C-212ENST00000569575 LPCAT1Q8NF37 534 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 NELL1Q92832 810 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 NEUROG2Q9H2A3 272 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 ANAPC5Q9UJX4 755 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 TRIOO75962 3097 aa23.57■■□□□ 1.36
RAB40C-212ENST00000569575 CAPN8A6NHC0 703 aa23.56■■□□□ 1.36
RAB40C-212ENST00000569575 BHMG1C9JSJ3 638 aaPredicted RBP23.56■■□□□ 1.36
RAB40C-212ENST00000569575 PPFIA2O75334 1257 aa23.56■■□□□ 1.36
RAB40C-212ENST00000569575 AGTP01019 485 aa23.56■■□□□ 1.36
RAB40C-212ENST00000569575 CD6P30203 668 aa23.56■■□□□ 1.36
RAB40C-212ENST00000569575 SPDYCQ5MJ68 293 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms