RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 GPR22Q99680 433 aa16.88■□□□□ 0.29
COX4I1-215ENST00000568339 MGME1Q9BQP7 344 aa16.88■□□□□ 0.29
COX4I1-215ENST00000568339 TRIM55Q9BYV6 548 aa16.88■□□□□ 0.29
COX4I1-215ENST00000568339 RHOJQ9H4E5 214 aa16.88■□□□□ 0.29
COX4I1-215ENST00000568339 ZNF334Q9HCZ1 680 aaPredicted RBP16.88■□□□□ 0.29
COX4I1-215ENST00000568339 MTO1Q9Y2Z2 717 aaKnown RBP16.88■□□□□ 0.29
COX4I1-215ENST00000568339 GSRP00390 522 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ESRRAP11474 423 aaPredicted RBP16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ANPEPP15144 967 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 CRABP2P29373 138 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ZNF235Q14590 738 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 PCSK7Q16549 785 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ATG16L1Q676U5 607 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ESRP1Q6NXG1 681 aaKnown RBP16.87■□□□□ 0.29
COX4I1-215ENST00000568339 LILRA6Q6PI73 481 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 OTOP2Q7RTS6 562 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ZC3HC1Q86WB0 502 aaKnown RBP16.87■□□□□ 0.29
COX4I1-215ENST00000568339 MYLK4Q86YV6 388 aaPredicted RBP16.87■□□□□ 0.29
COX4I1-215ENST00000568339 BBS5Q8N3I7 341 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 OR52K2Q8NGK3 314 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 VPS39Q96JC1 886 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 FEM1CQ96JP0 617 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 C7orf26Q96N11 449 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ECSITQ9BQ95 431 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ANGPTL2Q9UKU9 493 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.87■□□□□ 0.29
COX4I1-215ENST00000568339 GFRA2O00451 464 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 GREM1O60565 184 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 PLIN3O60664 434 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 MAGEC1O60732 1142 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 CNPP09543 421 aaKnown RBP16.87■□□□□ 0.29
COX4I1-215ENST00000568339 DLDP09622 509 aaKnown RBP16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ATXN1LP0C7T5 689 aaKnown RBP16.87■□□□□ 0.29
COX4I1-215ENST00000568339 PGM1P36871 562 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ETFBP38117 255 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 USP4Q13107 963 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ZNF177Q13360 481 aaPredicted RBP16.87■□□□□ 0.29
COX4I1-215ENST00000568339 CLEC14AQ86T13 490 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 FAM217AQ8IXS0 508 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 WBP2Q969T9 261 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 PSKH2Q96QS6 385 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 TMEM120AQ9BXJ8 343 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ATXN3LQ9H3M9 355 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 ALG13Q9NP73 1137 aaKnown RBP16.87■□□□□ 0.29
COX4I1-215ENST00000568339 CHCHD3Q9NX63 227 aaKnown RBP16.87■□□□□ 0.29
COX4I1-215ENST00000568339 SEPT3Q9UH03 358 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 COMMD3-BMI1R4GMX3 469 aa16.87■□□□□ 0.29
COX4I1-215ENST00000568339 MUSKO15146 869 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 TGM5O43548 720 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 PRKCGP05129 697 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 SPATA31D3P0C874 917 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 MBL2P11226 248 aaPredicted RBP16.86■□□□□ 0.29
COX4I1-215ENST00000568339 DNAJB1P25685 340 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 SGSHP51688 502 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 OXCT1P55809 520 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 PPIGQ13427 754 aaKnown RBP eCLIP16.86■□□□□ 0.294e-16■□□□□ 9
COX4I1-215ENST00000568339 N4BP2L1Q5TBK1 243 aaPredicted RBP16.86■□□□□ 0.29
COX4I1-215ENST00000568339 IZUMO2Q6UXV1 221 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 SPATA31D4Q6ZUB0 917 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 TTC7BQ86TV6 843 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 LCA5Q86VQ0 697 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 NUDCD3Q8IVD9 361 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 OR7D4Q8NG98 312 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 PEX13Q92968 403 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 E2F7Q96AV8 911 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 SEMA3CQ99985 751 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.86■□□□□ 0.29
COX4I1-215ENST00000568339 MROH6A6NGR9 719 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 VAPBO95292 243 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 RHOCP08134 193 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 PIM1P11309 404 aaPredicted RBP16.86■□□□□ 0.29
COX4I1-215ENST00000568339 HLA-DPA1P20036 260 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 CNGA3Q16281 694 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 CCDC153Q494R4 210 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 SIRPB2Q5JXA9 342 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 TSTD2Q5T7W7 516 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 Q6ZNB5 142 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 KIAA0408Q6ZU52 694 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 C2CD4AQ8NCU7 369 aaPredicted RBP16.86■□□□□ 0.29
COX4I1-215ENST00000568339 ADAMTS19Q8TE59 1207 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 LRRC3Q9BY71 257 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 UBA2Q9UBT2 640 aaPredicted RBP16.86■□□□□ 0.29
COX4I1-215ENST00000568339 INSL6Q9Y581 213 aa16.86■□□□□ 0.29
COX4I1-215ENST00000568339 RNASEH1O60930 286 aaKnown RBP16.85■□□□□ 0.29
COX4I1-215ENST00000568339 SNNO75324 88 aaPredicted RBP16.85■□□□□ 0.29
COX4I1-215ENST00000568339 FGBP02675 491 aa16.85■□□□□ 0.29
COX4I1-215ENST00000568339 PROCP04070 461 aa16.85■□□□□ 0.29
COX4I1-215ENST00000568339 FGF1P05230 155 aa16.85■□□□□ 0.29
COX4I1-215ENST00000568339 CES1P23141 567 aa16.85■□□□□ 0.29
COX4I1-215ENST00000568339 GABRB3P28472 473 aa16.85■□□□□ 0.29
COX4I1-215ENST00000568339 CDK18Q07002 472 aa16.85■□□□□ 0.29
COX4I1-215ENST00000568339 SMAD1Q15797 465 aaKnown RBP16.85■□□□□ 0.29
COX4I1-215ENST00000568339 IL31Q6EBC2 164 aa16.85■□□□□ 0.29
COX4I1-215ENST00000568339 CXorf57Q6NSI4 855 aaKnown RBP16.85■□□□□ 0.29
COX4I1-215ENST00000568339 NET1Q7Z628 596 aaPredicted RBP16.85■□□□□ 0.29
COX4I1-215ENST00000568339 GALNT7Q86SF2 657 aa16.85■□□□□ 0.29
COX4I1-215ENST00000568339 TRIM74Q86UV6 250 aa16.85■□□□□ 0.29
COX4I1-215ENST00000568339 TRIM73Q86UV7 250 aa16.85■□□□□ 0.29
COX4I1-215ENST00000568339 SLC25A41Q8N5S1 370 aa16.85■□□□□ 0.29
COX4I1-215ENST00000568339 FBXO27Q8NI29 283 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms