RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	CMKLR1	Q99788	373 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	FUCA2	Q9BTY2	467 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	B3GNT4	Q9C0J1	378 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	RAB6C	Q9H0N0	254 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	PDCL3	Q9H2J4	239 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	FOXJ2	Q9P0K8	574 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	RWDD2A	Q9UIY3	292 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	NEU3	Q9UQ49	428 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	COQ6	Q9Y2Z9	468 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	DGKB	Q9Y6T7	804 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	SPTBN1	Q01082	2364 aa	Known RBP	11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	TSPAN11	A1L157	253 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	C9orf172	C9J069	976 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	BUB1	O43683	1085 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	RAMP2	O60895	175 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	PPFIA2	O75334	1257 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	LRIG2	O94898	1065 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	LSM8	O95777	96 aa	Known RBP	11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	IGSF6	O95976	241 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	TNF	P01375	233 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	ELP6	Q0PNE2	266 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	INPP5A	Q14642	412 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	CLCA4	Q14CN2	919 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	INO80D	Q53TQ3	878 aa	Predicted RBP	11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	CERCAM	Q5T4B2	595 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	TMPRSS9	Q7Z410	1059 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	SPRED1	Q7Z699	444 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	SLITRK4	Q8IW52	837 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	EMC1	Q8N766	993 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	ATL2	Q8NHH9	583 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	HCAR2	Q8TDS4	363 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	WDR92	Q96MX6	357 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	MAGEB5	Q9BZ81	275 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	SLC25A18	Q9H1K4	315 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	NOL6	Q9H6R4	1146 aa	Known RBP	11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	KL	Q9UEF7	1012 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	OR1A2	Q9Y585	309 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	PCDHB11	Q9Y5F2	797 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	RNF215	Q9Y6U7	377 aa		11.48	□□□□□ -0.57
TCF4-238	ENST00000568169	FLNC	Q14315	2725 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	ICE1	Q9Y2F5	2266 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	FAM170A	A1A519	330 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	AGRP	O00253	132 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	INSIG1	O15503	277 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	PLEK	P08567	350 aa	Predicted RBP	11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	XPA	P23025	273 aa	Predicted RBP	11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	MAPK10	P53779	464 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	RHOA	P61586	193 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	NOMO3	P69849	1222 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	CYP4F2	P78329	520 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	TLE1	Q04724	770 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	MTM1	Q13496	603 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	UGP2	Q16851	508 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	C14orf28	Q4W4Y0	310 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	LURAP1L	Q8IV03	231 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	SFTPA2	Q8IWL1	248 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	NETO2	Q8NC67	525 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	MSANTD4	Q8NCY6	345 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	FAM46D	Q8NEK8	389 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	OR1E3	Q8WZA6	343 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	TBC1D31	Q96DN5	1066 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	HMCES	Q96FZ2	354 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	PDXP	Q96GD0	296 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	SLC12A9	Q9BXP2	914 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	KLC2	Q9H0B6	622 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	ADNP	Q9H2P0	1102 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	PCDH12	Q9NPG4	1184 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	METTL5	Q9NRN9	209 aa	Known RBP	11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	LRIT1	Q9P2V4	623 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	LHX3	Q9UBR4	397 aa		11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	SPTAN1	Q13813	2472 aa	Known RBP	11.47	□□□□□ -0.57
TCF4-238	ENST00000568169	BOD1L1	Q8NFC6	3051 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	NUDT21	O43809	227 aa	Known RBP	11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	MTIF2	P46199	727 aa	Known RBP	11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	YBEY	P58557	167 aa	Predicted RBP	11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	B4GALNT1	Q00973	533 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	ARHGEF7	Q14155	803 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	C16orf72	Q14CZ0	275 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	CDO1	Q16878	200 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	CCDC14	Q49A88	953 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	PHF19	Q5T6S3	580 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	TAF3	Q5VWG9	929 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	STRADA	Q7RTN6	431 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	TAF8	Q7Z7C8	310 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	NOP9	Q86U38	636 aa	Known RBP	11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	RTL3	Q8N8U3	475 aa	Known RBP	11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	RXFP2	Q8WXD0	754 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	CPA5	Q8WXQ8	436 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	CENPI	Q92674	756 aa	Predicted RBP	11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	SEMA6C	Q9H3T2	930 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	SUV39H2	Q9H5I1	410 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	FGF22	Q9HCT0	170 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	ANKMY1	Q9P2S6	941 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	DAAM1	Q9Y4D1	1078 aa		11.46	□□□□□ -0.57
TCF4-238	ENST00000568169	CFAP69	A5D8W1	941 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	TMEM202	A6NGA9	273 aa		11.45	□□□□□ -0.58

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