RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 HLA-BQ31612 363 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 TEX35Q5T0J7 233 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 CFAP58Q5T655 872 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 SYDE1Q6ZW31 735 aaPredicted RBP13.57□□□□□ -0.24
CLK3-218ENST00000566926 BBS12Q6ZW61 710 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 BZW1Q7L1Q6 419 aaKnown RBP13.57□□□□□ -0.24
CLK3-218ENST00000566926 PARS2Q7L3T8 475 aaKnown RBP13.57□□□□□ -0.24
CLK3-218ENST00000566926 ATPAF2Q8N5M1 289 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 NPWQ8N729 165 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 ZNF641Q96N77 438 aaPredicted RBP13.57□□□□□ -0.24
CLK3-218ENST00000566926 TUBGCP5Q96RT8 1024 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 EBF2Q9HAK2 575 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 HAUS2Q9NVX0 235 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 DKK3Q9UBP4 350 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 LHX3Q9UBR4 397 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 SEPT3Q9UH03 358 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 FADS3Q9Y5Q0 445 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 LRRK1Q38SD2 2015 aa13.57□□□□□ -0.24
CLK3-218ENST00000566926 APOC4-APOC2K7ER74 178 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 YKT6O15498 198 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 GJB3O75712 270 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 APOC2P02655 101 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 TGM2P21980 687 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 HNRNPA2B1P22626 353 aaKnown RBP13.56□□□□□ -0.24
CLK3-218ENST00000566926 AKT2P31751 481 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 GKP32189 559 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 CTSKP43235 329 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 NOVA1P51513 510 aaKnown RBP13.56□□□□□ -0.24
CLK3-218ENST00000566926 ZNF235Q14590 738 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 LBRQ14739 615 aaKnown RBP13.56□□□□□ -0.24
CLK3-218ENST00000566926 ATP13A4Q4VNC1 1196 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 SRLQ86TD4 932 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 TTC7BQ86TV6 843 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 OXR1Q8N573 874 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 NOA1Q8NC60 698 aaKnown RBP13.56□□□□□ -0.24
CLK3-218ENST00000566926 SLCO2A1Q92959 643 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 MAGOHBQ96A72 148 aaKnown RBP13.56□□□□□ -0.24
CLK3-218ENST00000566926 RNF157Q96PX1 679 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 AP1M1Q9BXS5 423 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 ATP13A3Q9H7F0 1226 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 TM7SF3Q9NS93 570 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 ETNK2Q9NVF9 386 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 KLHL11Q9NVR0 708 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 PCYOX1Q9UHG3 505 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 PCDHGB2Q9Y5G2 931 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 SNX11Q9Y5W9 270 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 SLCO1B1Q9Y6L6 691 aa13.56□□□□□ -0.24
CLK3-218ENST00000566926 A0A1W2PR77 199 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 FAM187AA6NFU0 413 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 TLR4O00206 839 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 RNF103O00237 685 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 DYNC1I1O14576 645 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 SLC31A1O15431 190 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 CST8O60676 142 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 GAS8O95995 478 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 IL4RP24394 825 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 SERPINA4P29622 427 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 NR2C2P49116 596 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 CCT8P50990 548 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 BNC1Q01954 994 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 ELP6Q0PNE2 266 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 MMRN1Q13201 1228 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 SGCGQ13326 291 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 PAFAH1B3Q15102 231 aaKnown RBP13.55□□□□□ -0.24
CLK3-218ENST00000566926 SIX1Q15475 284 aaPredicted RBP13.55□□□□□ -0.24
CLK3-218ENST00000566926 ZNF423Q2M1K9 1284 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 ZNF284Q2VY69 593 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 ANKRD20A8PQ5CZ79 823 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 SLC9A4Q6AI14 798 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 TIGD7Q6NT04 549 aaPredicted RBP13.55□□□□□ -0.24
CLK3-218ENST00000566926 PSAPL1Q6NUJ1 521 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 BRAT1Q6PJG6 821 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 PIP4P1Q86T03 277 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 PAF1Q8N7H5 531 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 PRELID2Q8N945 189 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 TSEN2Q8NCE0 465 aaKnown RBP13.55□□□□□ -0.24
CLK3-218ENST00000566926 OR2I1PQ8NGU4 316 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 CCHCR1Q8TD31 782 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 ASB12Q8WXK4 309 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 KLHDC7BQ96G42 594 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 EXOC2Q96KP1 924 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 PSKH2Q96QS6 385 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 KRT12Q99456 494 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 HEMGNQ9BXL5 484 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 SLC17A9Q9BYT1 436 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 RAB17Q9H0T7 212 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 SUV39H2Q9H5I1 410 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 SMARCAL1Q9NZC9 954 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 PCDHB9Q9Y5E1 797 aa13.55□□□□□ -0.24
CLK3-218ENST00000566926 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.54□□□□□ -0.24
CLK3-218ENST00000566926 A0A1W2PQ67 120 aa13.54□□□□□ -0.24
CLK3-218ENST00000566926 NDC80O14777 642 aa13.54□□□□□ -0.24
CLK3-218ENST00000566926 APOL1O14791 398 aa13.54□□□□□ -0.24
CLK3-218ENST00000566926 FLRT2O43155 660 aa13.54□□□□□ -0.24
CLK3-218ENST00000566926 MAFKO60675 156 aa13.54□□□□□ -0.24
CLK3-218ENST00000566926 CD48P09326 243 aa13.54□□□□□ -0.24
CLK3-218ENST00000566926 CD59P13987 128 aa13.54□□□□□ -0.24
CLK3-218ENST00000566926 MX2P20592 715 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms