RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 CPNE8Q86YQ8 564 aa12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 BBS5Q8N3I7 341 aa12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 ATPAF2Q8N5M1 289 aa12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 KDF1Q8NAX2 398 aaPredicted RBP12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 PCDH19Q8TAB3 1148 aa12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 NSMCE1Q8WV22 266 aa12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 FATE1Q969F0 183 aa12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 CNDP2Q96KP4 475 aaKnown RBP12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 NUDCD1Q96RS6 583 aa12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 MGME1Q9BQP7 344 aa12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 SPTLC3Q9NUV7 552 aa12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 ATP8A1Q9Y2Q0 1164 aa12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 ZFC3H1O60293 1989 aaKnown RBP12.74□□□□□ -0.37
LPCAT4-206ENST00000566581 NEMP2A6NFY4 417 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 ZNF487B1APH4 448 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 C1QTNF9BB2RNN3 333 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 HTRA2O43464 458 aaPredicted RBP12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 SOCS5O75159 536 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 C1QTNF9P0C862 333 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 NME1P15531 152 aaKnown RBP12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 CKMT2P17540 419 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 GARSP41250 739 aaKnown RBP12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 GALNT2Q10471 571 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 PTK2BQ14289 1009 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 MESDQ14696 234 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 SMAD1Q15797 465 aaKnown RBP12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 MARC1Q5VT66 337 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 LRRC38Q5VT99 294 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 NCBP2-AS2Q69YL0 99 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 CCNI2Q6ZMN8 369 aaPredicted RBP12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 PARGQ86W56 976 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 GALNT15Q8N3T1 639 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 TEX26Q8N6G2 289 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 TC2NQ8N9U0 490 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 TP53I13Q8NBR0 393 aaPredicted RBP12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 OR4C6Q8NH72 309 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 RFFLQ8WZ73 363 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 NSMCE3Q96MG7 304 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 TSGA13Q96PP4 275 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 WRAP53Q9BUR4 548 aaKnown RBP12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 DNAJC28Q9NX36 388 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 CSNK1G3Q9Y6M4 447 aa12.73□□□□□ -0.37
LPCAT4-206ENST00000566581 FAM208BQ5VWN6 2430 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 TMEM110-MUSTN1A8MSY1 372 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 TRIM38O00635 465 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 SCAMP1O15126 338 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 SDC3O75056 442 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 LCA5LO95447 670 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 GIMD1P0DJR0 217 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 C6P13671 934 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 CES1P23141 567 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 KDELR1P24390 212 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 CCNCP24863 283 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 IGFALSP35858 605 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 SLC1A1P43005 524 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 MMP13P45452 471 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 LIG3P49916 1009 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 PEX5P50542 639 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 THOP1P52888 689 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 HADHBP55084 474 aaKnown RBP12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 ILKQ13418 452 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 PDE1CQ14123 709 aaPredicted RBP12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 LRRC14Q15048 493 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 IFI16Q16666 785 aaKnown RBP12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 ST3GAL2Q16842 350 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 WSCD2Q2TBF2 565 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 PROX2Q3B8N5 592 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 TIGD7Q6NT04 549 aaPredicted RBP12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 DPPA4Q7L190 304 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 PGBD5Q8N414 524 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 MAML1Q92585 1016 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 TBATAQ96M53 351 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 MBNL1Q9NR56 388 aaKnown RBP12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 UCKL1Q9NWZ5 548 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 NLGN3Q9NZ94 848 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 AMACRQ9UHK6 382 aa12.72□□□□□ -0.37
LPCAT4-206ENST00000566581 GOLGA8CPA6NN73 597 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 H3BM21 787 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 MATN3O15232 486 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 SIGLEC6O43699 453 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 MFSD11O43934 449 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 RFPL3O75679 317 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 MX2P20592 715 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 ACP1P24666 158 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 NFKBIAP25963 317 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 GJC1P36383 396 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 ACADVLP49748 655 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 RALGDSQ12967 914 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 EIF2B5Q13144 721 aaKnown RBP12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 HS1BP3Q53T59 392 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 TPRG1LQ5T0D9 272 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 ALG1LQ6GMV1 187 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 LIPIQ6XZB0 460 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 TMPRSS12Q86WS5 348 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 CCDC170Q8IYT3 715 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 PQLC3Q8N755 202 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 FAM181AQ8N9Y4 354 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 BTN2A2Q8WVV5 523 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 RAPGEF5Q92565 580 aa12.71□□□□□ -0.37
LPCAT4-206ENST00000566581 MRFAP1L1Q96HT8 127 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms