RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 ATP13A3Q9H7F0 1226 aa17.56■□□□□ 0.4
MAP1LC3B-207ENST00000565788 CBX8Q9HC52 389 aa17.56■□□□□ 0.4
MAP1LC3B-207ENST00000565788 MRPL47Q9HD33 250 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-207ENST00000565788 RP1P56715 2156 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 EME2A4GXA9 379 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 PCCBP05166 539 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 CELA2BP08218 269 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 SERPINA4P29622 427 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 PCK1P35558 622 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 PBX1P40424 430 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ABCG1P45844 678 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 HCAR3P49019 387 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 LIG3P49916 1009 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ZNF135P52742 658 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 FANCCQ00597 558 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 PPARDQ03181 441 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 RFTN1Q14699 578 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 NR0B2Q15466 257 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 NYAP1Q6ZVC0 841 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 LUZP1Q86V48 1076 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 SNIP1Q8TAD8 396 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ECHDC3Q96DC8 303 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 BOCQ9BWV1 1114 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 SLC13A1Q9BZW2 595 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ABCG4Q9H172 646 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ZWILCHQ9H900 591 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ETNK2Q9NVF9 386 aa17.55■□□□□ 0.4
MAP1LC3B-207ENST00000565788 SYCE3A1L190 88 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 LMO7DNF2Z398 122 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 H3BRJ5 948 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 LZTS3O60299 673 aaPredicted RBP17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 CSO75390 466 aaKnown RBP17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ANXA6P08133 673 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 TSHRP16473 764 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 TGM2P21980 687 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 AMPD1P23109 780 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 PEX5P50542 639 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 BCL2L1Q07817 233 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 RALGDSQ12967 914 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ACAP1Q15027 740 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 AGERQ15109 404 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 DPYSL2Q16555 572 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ALG11Q2TAA5 492 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 PERM1Q5SV97 790 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 C6orf132Q5T0Z8 1188 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 CRTC1Q6UUV9 634 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ENPP7Q6UWV6 458 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 SLC35F3Q8IY50 421 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 HSPH1Q92598 858 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 TSACCQ96A04 125 aaPredicted RBP17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 BTBD6Q96KE9 485 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 APOOQ9BUR5 198 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 NCKIPSDQ9NZQ3 722 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 OR1A2Q9Y585 309 aa17.54■□□□□ 0.4
MAP1LC3B-207ENST00000565788 LOC400499M0QZD8 3231 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 A0A1W2PQJ5 194 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 TTC24A2A3L6 582 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 YY2O15391 372 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 MPOP05164 745 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ARL4AP40617 200 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 SCNN1BP51168 640 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 HK3P52790 923 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 NSUN2Q08J23 767 aaKnown RBP eCLIP17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 SLC10A7Q0GE19 358 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 INPP5AQ14642 412 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 LBRQ14739 615 aaKnown RBP17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 NFATC4Q14934 902 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 TCEA2Q15560 299 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 TBC1D25Q3MII6 688 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 SOWAHCQ53LP3 525 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 TMCO4Q5TGY1 634 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 TXNRD3NBQ6F5E7 133 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 LRRC69Q6ZNQ3 347 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 POLNQ7Z5Q5 900 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 HID1Q8IV36 788 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 LZTR1Q8N653 840 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 PLA2G15Q8NCC3 412 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 FGF11Q92914 225 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 PSKH2Q96QS6 385 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 THAP2Q9H0W7 228 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 SEPT3Q9UH03 358 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 SHROOM3Q8TF72 1996 aa17.53■□□□□ 0.4
MAP1LC3B-207ENST00000565788 CFAP69A5D8W1 941 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 TMEM110-MUSTN1A8MSY1 372 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 TRAFD1O14545 582 aaPredicted RBP17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 CASC3O15234 703 aaKnown RBP17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 USP12O75317 370 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 RARAP10276 462 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 GM2AP17900 193 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 HTR1BP28222 390 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 ACTN2P35609 894 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 BLKP51451 505 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 UBASH3AP57075 661 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 AP1S1P61966 158 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 TPM4P67936 248 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 GABREP78334 506 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 MTM1Q13496 603 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 BOLA3Q53S33 107 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms