RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PIAS2O75928 621 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 NEBLO76041 1014 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 PROSCO94903 275 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 SERPINB6P35237 376 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 RABIFP47224 123 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 GSDMDP57764 484 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 ELP6Q0PNE2 266 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 FZD2Q14332 565 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 GRM3Q14832 879 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 IRF4Q15306 451 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 UGP2Q16851 508 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 ERAP2Q6P179 960 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 RAD9BQ6WBX8 426 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 RHOT2Q8IXI1 618 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 KCTD6Q8NC69 237 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 LRRN4Q8WUT4 740 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 NSMCE1Q8WV22 266 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 LUC7LQ9NQ29 371 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 SCUBE2Q9NQ36 999 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 MYLKQ15746 1914 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 SMG1Q96Q15 3661 aaKnown RBP13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 SCAMP1O15126 338 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 MFSD11O43934 449 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 RFPL3O75679 317 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 PCCBP05166 539 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 C6P13671 934 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 TNNT1P13805 278 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 MAN1A1P33908 653 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 ARHGAP25P42331 645 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 LIG3P49916 1009 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 RENBPP51606 427 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 HADHBP55084 474 aaKnown RBP13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 ITKQ08881 620 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 DPYSL3Q14195 570 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 RFTN1Q14699 578 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 TMEM52BQ4KMG9 183 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 BRAT1Q6PJG6 821 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 CCNI2Q6ZMN8 369 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 ZSCAN30Q86W11 494 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 PARGQ86W56 976 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 DCP2Q8IU60 420 aaKnown RBP13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 RBFAQ8N0V3 343 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 TP53I13Q8NBR0 393 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 DENND6BQ8NEG7 585 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 LMX1AQ8TE12 382 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 TSC1Q92574 1164 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 NSMCE3Q96MG7 304 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 ZNF641Q96N77 438 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 LENG8Q96PV6 779 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 TUBGCP5Q96RT8 1024 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 C1QTNF7Q9BXJ2 289 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 NT5MQ9NPB1 228 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 ATP8A1Q9Y2Q0 1164 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 REXO2Q9Y3B8 237 aaKnown RBP13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 PCDHGC4Q9Y5F7 938 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 DMXL2Q8TDJ6 3036 aa13.73□□□□□ -0.21
VPS9D1-204ENST00000565023 SPTY2D1-AS1A0A0U1RR47 76 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 TSPAN11A1L157 253 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 H3BM21 787 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 MAFKO60675 156 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 JUNDP17535 347 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 CKMT2P17540 419 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 IL4RP24394 825 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 MMP13P45452 471 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 ACADVLP49748 655 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 PFN3P60673 137 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 HNRNPKP61978 463 aaKnown RBP eCLIP13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 EIF2B5Q13144 721 aaKnown RBP13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 C1orf61Q13536 156 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 LRRC14Q15048 493 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 DENND2CQ68D51 928 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 TMPRSS7Q7RTY8 843 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 BBS5Q8N3I7 341 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 PGBD5Q8N414 524 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 FAM174AQ8TBP5 190 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 MDM1Q8TC05 714 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 ASB12Q8WXK4 309 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 CENPTQ96BT3 561 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 ZNF599Q96NL3 588 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 PSKH2Q96QS6 385 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 TCEAL2Q9H3H9 227 aaPredicted RBP13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 KLF15Q9UIH9 416 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 TTLL3Q9Y4R7 772 aa13.72□□□□□ -0.21
VPS9D1-204ENST00000565023 ASH1LQ9NR48 2969 aaKnown RBP13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 RCCD1A6NED2 376 aa13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 DKK1O94907 266 aa13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 IPO7O95373 1038 aaKnown RBP13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 PEX11BO96011 259 aa13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 CSF2P04141 144 aa13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 ELFN1P0C7U0 828 aa13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 ALPPL2P10696 532 aa13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 JUPP14923 745 aa13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 NME1P15531 152 aaKnown RBP13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 MMP12P39900 470 aa13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 CSNK1DP48730 415 aa13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 AP1S1P61966 158 aa13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 PTK2BQ14289 1009 aa13.71□□□□□ -0.21
VPS9D1-204ENST00000565023 WSCD2Q2TBF2 565 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms