RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SAMD4BQ5PRF9 694 aaKnown RBP20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 OTUD1Q5VV17 481 aaPredicted RBP20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ANKRD52Q8NB46 1076 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ADNPQ9H2P0 1102 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 VPS45Q9NRW7 570 aa20.62■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ANK1P16157 1881 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 IGKV6-21A0A0C4DH24 114 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TARM1B6A8C7 271 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SPTLC1O15269 473 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CARTPTQ16568 116 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 RABL3Q5HYI8 236 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 FUNDC1Q8IVP5 155 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 HM13Q8TCT9 377 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 HDAC10Q969S8 669 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 KCNA7Q96RP8 456 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 EIF2AQ9BY44 585 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 AS3MTQ9HBK9 375 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 KANSL1LA0AUZ9 987 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 H3BMM5 538 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TXNP10599 105 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 MLLT10P55197 1068 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 MAP3K7CLP57077 242 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SCIMPQ6UWF3 145 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ERMP1Q7Z2K6 904 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PIWIL3Q7Z3Z3 882 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CAMK1DQ8IU85 385 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 DDIASQ8IXT1 998 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 EMID1Q96A84 441 aaPredicted RBP20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 VPS33AQ96AX1 596 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ALG9Q9H6U8 611 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 FANCEQ9HB96 536 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 WARS2Q9UGM6 360 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CD300AQ9UGN4 299 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 BTRCQ9Y297 605 aa20.61■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SLCO1B7G3V0H7 640 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 UBFD1O14562 309 aaKnown RBP20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CAPNS1P04632 268 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 APOA4P06727 396 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 HSPA8P11142 646 aaKnown RBP20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 BCAP31P51572 246 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PLA2G4EQ3MJ16 856 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 IFNLR1Q8IU57 520 aaPredicted RBP20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PELI3Q8N2H9 469 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 PDZD8Q8NEN9 1154 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 BORCS5Q969J3 196 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 MED10Q9BTT4 135 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 LRRC4Q9HBW1 653 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 HUS1O60921 280 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SIX3O95343 332 aaPredicted RBP20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ALDOCP09972 364 aaKnown RBP20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 KCNC1P48547 511 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TUBA4AP68366 448 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ANKRD26P1Q6NSI1 321 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 DEFB132Q7Z7B7 95 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 AGBL3Q8NEM8 1001 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 FICDQ9BVA6 458 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SNX25Q9H3E2 840 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SLC27A5Q9Y2P5 690 aa20.6■□□□□ 0.89
MAP1LC3B-206ENST00000564844 A0A0J9YYE9 177 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 A8MT66 165 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CBFA2T3O75081 653 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 FASP25445 335 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ZNF829Q3KNS6 432 aaPredicted RBP20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TMEM214Q6NUQ4 689 aaKnown RBP20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 MOB2Q70IA6 237 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 DNERQ8NFT8 737 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TMEM74Q96NL1 305 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 DGCR6LQ9BY27 220 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 DDIT4Q9NX09 232 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 IPO11Q9UI26 975 aaKnown RBP20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TRAF6Q9Y4K3 522 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ZFC3H1O60293 1989 aaKnown RBP20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 KPNA6O60684 536 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 IL10P22301 178 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TMED10P49755 219 aaKnown RBP20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ECT2LQ008S8 904 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CREB5Q02930 508 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 GSTM4Q03013 218 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SMG8Q8ND04 991 aaKnown RBP20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ANKRD49Q8WVL7 239 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 RNF34Q969K3 372 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CAMKK2Q96RR4 588 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 OLFM1Q99784 485 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 VRTNQ9H8Y1 702 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TMEM181Q9P2C4 612 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TIMM13Q9Y5L4 95 aaPredicted RBP20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TTC24A2A3L6 582 aaPredicted RBP20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 A8MU76 341 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 DCLK1O15075 740 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TNFAIP2Q03169 654 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SQLEQ14534 574 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 TBPL2Q6SJ96 375 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 OR52K2Q8NGK3 314 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 OTUD5Q96G74 571 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 NEURL2Q9BR09 285 aa20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 UTP6Q9NYH9 597 aaKnown RBP20.59■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CDH3P22223 829 aa20.58■□□□□ 0.89
MAP1LC3B-206ENST00000564844 STX1BP61266 288 aa20.58■□□□□ 0.89
MAP1LC3B-206ENST00000564844 CDH17Q12864 832 aa20.58■□□□□ 0.89
MAP1LC3B-206ENST00000564844 GRB7Q14451 532 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms