RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 KDM4BO94953 1096 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 CAMTA2O94983 1202 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 GPD2P43304 727 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 EFNB1P98172 346 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.89□□□□□ -1.63
UBR1-205ENST00000564540 GRIK3Q13003 919 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 TAF12Q16514 161 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 CALCRLQ16602 461 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 ZNF672Q499Z4 452 aaPredicted RBP4.89□□□□□ -1.63
UBR1-205ENST00000564540 ZNF766Q5HY98 468 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 PAPPA-AS1Q5QFB9 102 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 WBP2NLQ6ICG8 309 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 TADA2BQ86TJ2 420 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 GCC1Q96CN9 775 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 MTBPQ96DY7 904 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 UBXN10Q96LJ8 280 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 SCLT1Q96NL6 688 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 IL17FQ96PD4 163 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 GPR63Q9BZJ6 419 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 CNOT7Q9UIV1 285 aaKnown RBP4.89□□□□□ -1.63
UBR1-205ENST00000564540 CDC14AQ9UNH5 594 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 CARD8Q9Y2G2 431 aa4.89□□□□□ -1.63
UBR1-205ENST00000564540 MAGEA13PA6NCF6 341 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 TEX22C9J3V5 150 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 IFNL4K9M1U5 179 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 WNT9BO14905 357 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 BUB3O43684 328 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 TACC1O75410 805 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 NDUFB4O95168 129 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 CLDN14O95500 239 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 CDH15P55291 814 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 DLX5P56178 289 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 BRWD1-AS2P59051 145 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 POU5F1BQ06416 359 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 ILF3Q12906 894 aaKnown RBP eCLIP4.88□□□□□ -1.63
UBR1-205ENST00000564540 ITGADQ13349 1161 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 VEPH1Q14D04 833 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 TAF11Q15544 211 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 MMEL1Q495T6 779 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 ZNF628Q5EBL2 1059 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 C9orf50Q5SZB4 431 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 CYP26C1Q6V0L0 522 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 B3GNT6Q6ZMB0 384 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 LRRC8DQ7L1W4 858 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 CREB3L4Q8TEY5 395 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 BICD1Q96G01 975 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 MAELQ96JY0 434 aaKnown RBP4.88□□□□□ -1.63
UBR1-205ENST00000564540 SIN3AQ96ST3 1273 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 MMTAG2Q9BU76 263 aaKnown RBP4.88□□□□□ -1.63
UBR1-205ENST00000564540 INTS2Q9H0H0 1204 aaKnown RBP4.88□□□□□ -1.63
UBR1-205ENST00000564540 VPS33BQ9H267 617 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 DDX4Q9NQI0 724 aaKnown RBP4.88□□□□□ -1.63
UBR1-205ENST00000564540 SMYD2Q9NRG4 433 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 TXLNGQ9NUQ3 528 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 DONSONQ9NYP3 566 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 HSPB7Q9UBY9 170 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 SLCO3A1Q9UIG8 710 aa4.88□□□□□ -1.63
UBR1-205ENST00000564540 GOLGA6L10A0A0M3HER8 536 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 TULP2O00295 520 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 CLGNO14967 610 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 BCAT2O15382 392 aaPredicted RBP4.87□□□□□ -1.63
UBR1-205ENST00000564540 NDUFS7O75251 213 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 PMS2P2O95744 297 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 IGKV3-20P01619 116 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 POLBP06746 335 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 GALTP07902 379 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 ETFAP13804 333 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 HSD3B1P14060 373 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 POU1F1P28069 291 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 HNRNPH1P31943 449 aaKnown RBP4.87□□□□□ -1.63
UBR1-205ENST00000564540 PSMC2P35998 433 aaKnown RBP4.87□□□□□ -1.63
UBR1-205ENST00000564540 TMEM81Q6P7N7 255 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 RFLNBQ8N5W9 214 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 NEK9Q8TD19 979 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 ZBTB10Q96DT7 871 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 C3orf30Q96M34 536 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 OR1F2PQ96R84 312 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 BBS4Q96RK4 519 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 BEX4Q9NWD9 120 aaPredicted RBP4.87□□□□□ -1.63
UBR1-205ENST00000564540 GGA3Q9NZ52 723 aa4.87□□□□□ -1.63
UBR1-205ENST00000564540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.87□□□□□ -1.63
UBR1-205ENST00000564540 PRAC2D3DTV9 90 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 GRID2O43424 1007 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 GUCY1B2O75343 617 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 GAGE7O76087 117 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 MTA2O94776 668 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 HEXAP06865 529 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 GAGE12FP0CL80 117 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 GAGE12GP0CL81 117 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 GAGE12IP0CL82 117 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 MT3P25713 68 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 CHATP28329 748 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 GGT5P36269 586 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 GAGE1Q13065 139 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 GAGE4Q13068 117 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 AMZ1Q400G9 498 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 ANKRD54Q6NXT1 300 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 ZNF771Q7L3S4 317 aaPredicted RBP4.86□□□□□ -1.63
UBR1-205ENST00000564540 ZNF329Q86UD4 541 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 TMTC1Q8IUR5 882 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms