RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 LONRF1Q17RB8 773 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 MSS51Q4VC12 460 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 LGSNQ5TDP6 509 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 KCTD16Q68DU8 428 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 IL31Q6EBC2 164 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 CASC4Q6P4E1 433 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 KDM7AQ6ZMT4 941 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 ZNF534Q76KX8 674 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 CIR1Q86X95 450 aaPredicted RBP9.85□□□□□ -0.83
UBFD1-203ENST00000564106 CNTD1Q8N815 330 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 UHMK1Q8TAS1 419 aaKnown RBP9.85□□□□□ -0.83
UBFD1-203ENST00000564106 LRRN4Q8WUT4 740 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 PTCD2Q8WV60 388 aaKnown RBP9.85□□□□□ -0.83
UBFD1-203ENST00000564106 ARHGEF2Q92974 986 aaKnown RBP9.85□□□□□ -0.83
UBFD1-203ENST00000564106 BHMTQ93088 406 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 TLCD1Q96CP7 247 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 OTUB2Q96DC9 234 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 TMA16Q96EY4 203 aaKnown RBP9.85□□□□□ -0.83
UBFD1-203ENST00000564106 ZC3H10Q96K80 434 aaKnown RBP9.85□□□□□ -0.83
UBFD1-203ENST00000564106 SIGLEC10Q96LC7 697 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 MUC3BQ9H195 1237 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 CASS4Q9NQ75 786 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 FSCN3Q9NQT6 498 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 TBC1D14Q9P2M4 693 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 SEPT3Q9UH03 358 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 EBF1Q9UH73 591 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 ADAM21Q9UKJ8 722 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 CDV3Q9UKY7 258 aaKnown RBP9.85□□□□□ -0.83
UBFD1-203ENST00000564106 RAB23Q9ULC3 237 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 NOVA2Q9UNW9 492 aaKnown RBP9.85□□□□□ -0.83
UBFD1-203ENST00000564106 TTLL3Q9Y4R7 772 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 MUC22E2RYF6 1773 aaPredicted RBP9.85□□□□□ -0.83
UBFD1-203ENST00000564106 ATXN2Q99700 1313 aaKnown RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 ZFHX4Q86UP3 3567 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 CCDC163A0A0D9SF12 145 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 TCRBV9S1A1TA0A576 114 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 SMIM23A6NLE4 172 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 PRRT4C9JH25 899 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 SLC9A3R1O14745 358 aaPredicted RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 HOXC11O43248 304 aaPredicted RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 KDELR3O43731 214 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 TBL1XO60907 577 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 AVILO75366 819 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 LUC7L3O95232 432 aaKnown RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 PEX11BO96011 259 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 HLA-DQB2P05538 268 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 INHBAP08476 426 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 SSTR1P30872 391 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 MPLP40238 635 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 MSH2P43246 934 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 DGKEP52429 567 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 GPX6P59796 221 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 MAGOHP61326 146 aaKnown RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 RPS24P62847 133 aaKnown RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 PPP2R2AP63151 447 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 SKOR1P84550 965 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 FOXK2Q01167 660 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 LAMB3Q13751 1172 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 FRG1Q14331 258 aaKnown RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 CRY1Q16526 586 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 FBXO43Q4G163 708 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 TNFAIP8L3Q5GJ75 292 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 RALGPS1Q5JS13 557 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 SPANXN3Q5MJ09 141 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 SYCP2LQ5T4T6 812 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 EGFLAMQ63HQ2 1017 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 STEAP4Q687X5 459 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 ALG1LQ6GMV1 187 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 KIAA1211LQ6NV74 962 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 ARHGAP36Q6ZRI8 547 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 LRRC6Q86X45 466 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 CFAP52Q8N1V2 620 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 CAMKK1Q8N5S9 505 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 NETO2Q8NC67 525 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 TSTD1Q8NFU3 115 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 GABPB2Q8TAK5 448 aaPredicted RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 FBF1Q8TES7 1133 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 TTC17Q96AE7 1141 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 ACDQ96AP0 544 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 IMP4Q96G21 291 aaKnown RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 CFAP36Q96G28 342 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 CNTNAP3BQ96NU0 1288 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 PSKH2Q96QS6 385 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 XPO6Q96QU8 1125 aaKnown RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 TBL1YQ9BQ87 522 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 C2orf49Q9BVC5 232 aaPredicted RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 CINPQ9BW66 212 aaPredicted RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 CNTNAP3Q9BZ76 1288 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 ATP13A1Q9HD20 1204 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 NT5MQ9NPB1 228 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 SPHK2Q9NRA0 654 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 PSD3Q9NYI0 1048 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 PLK2Q9NYY3 685 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 UBA2Q9UBT2 640 aaPredicted RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 RABGEF1Q9UJ41 708 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 ASCC3Q8N3C0 2202 aaKnown RBP9.84□□□□□ -0.83
UBFD1-203ENST00000564106 PCDH15Q96QU1 1955 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 CACNA1EQ15878 2313 aa9.84□□□□□ -0.83
UBFD1-203ENST00000564106 CACNA1BQ00975 2339 aa9.83□□□□□ -0.84
UBFD1-203ENST00000564106 SPEGQ15772 3267 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms