RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 NMBRP28336 390 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 SLC7A1P30825 629 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 IKBKEQ14164 716 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ARHGEF6Q15052 776 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 MGAT5BQ3V5L5 792 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 PDCD4Q53EL6 469 aaKnown RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 RBM12BQ8IXT5 1001 aaKnown RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 TBC1D21Q8IYX1 336 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 MARVELD2Q8N4S9 558 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 CDYL2Q8N8U2 506 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 COPS5Q92905 334 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 QKIQ96PU8 341 aaKnown RBP eCLIP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 TRIM62Q9BVG3 475 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 OXCT2Q9BYC2 517 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ENTPD7Q9NQZ7 604 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ARHGEF4Q9NR80 690 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 BTBD3Q9Y2F9 522 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 AZIN1O14977 448 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 IPO13O94829 963 aaKnown RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ZNF286BP0CG31 522 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 HDCP19113 662 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 PGGT1BP53609 377 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 JAG1P78504 1218 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ARMCX4Q5H9R4 360 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ZC3H12BQ5HYM0 836 aaKnown RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 IL27RAQ6UWB1 636 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 GCNT7Q6ZNI0 430 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 NUAK2Q9H093 628 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 DDX43Q9NXZ2 648 aaKnown RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 PARP4Q9UKK3 1724 aaKnown RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 CDH9Q9ULB4 789 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 CNOT6Q9ULM6 557 aaKnown RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 INVSQ9Y283 1065 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 TIMM22Q9Y584 194 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 E7ESA3 106 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ENDOD1O94919 500 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 MTHFD1P11586 935 aaKnown RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ITGB6P18564 788 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 S100A1P23297 94 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ADORA2AP29274 412 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 MATKP42679 507 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 IDH2P48735 452 aaKnown RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 NRG1Q02297 640 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 EPGNQ6UW88 154 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 NCCRP1Q6ZVX7 275 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 SVOPQ8N4V2 548 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 OR6J1Q8NGC5 347 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 SPATA22Q8NHS9 363 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 FNDC8Q8TC99 324 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 HM13Q8TCT9 377 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ASB9Q96DX5 294 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 LEF1Q9UJU2 399 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 TNFSF13BQ9Y275 285 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 MYH11P35749 1972 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 CCL22O00626 93 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ZBTB14O43829 449 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 MYO1DO94832 1006 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 ALDOAP04075 364 aaKnown RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 FMO4P31512 558 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 GPD2P43304 727 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 TAS2R39P59534 338 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 MAXP61244 160 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 CEACAM7Q14002 265 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 SIM2Q14190 667 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 MAPRE1Q15691 268 aaKnown RBP12.67□□□□□ -0.38
COMMD4-209ENST00000564068 DDR2Q16832 855 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 DCAF4L1Q3SXM0 396 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 SETD9Q8NE22 299 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 MCFD2Q8NI22 146 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 HDAC10Q969S8 669 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 KANSL3Q9P2N6 904 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 SYNPO2Q9UMS6 1093 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 SH3BP1Q9Y3L3 701 aa12.67□□□□□ -0.38
COMMD4-209ENST00000564068 LAMA4Q16363 1823 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 BCAS2O75934 225 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 SLC2A3P11169 496 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 ADSLP30566 484 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 RGS4P49798 205 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 GLYATQ6IB77 296 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 TIGD7Q6NT04 549 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 THAP5Q7Z6K1 395 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 ADHFE1Q8IWW8 467 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 HASPINQ8TF76 798 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 HOPXQ9BPY8 73 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 VWA7Q9Y334 891 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 ATRNL1Q5VV63 1379 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 B4GALT4O60513 344 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 CPSF4O95639 269 aaKnown RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 CYP4F2P78329 520 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 RHDQ02161 417 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 CYP4F3Q08477 520 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 PPP1R8Q12972 351 aaKnown RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 PRKG2Q13237 762 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 ESRP1Q6NXG1 681 aaKnown RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 RPS27LQ71UM5 84 aaKnown RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 C11orf74Q86VG3 221 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 CENPSQ8N2Z9 138 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 CLEC4CQ8WTT0 213 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 S100ZQ8WXG8 99 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms