RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 SHROOM3Q8TF72 1996 aa25.36■■□□□ 1.65
SPG7-208ENST00000563783 C6P13671 934 aa25.36■■□□□ 1.65
SPG7-208ENST00000563783 EIF4A3P38919 411 aaKnown RBP25.36■■□□□ 1.65
SPG7-208ENST00000563783 UBASH3AP57075 661 aa25.36■■□□□ 1.65
SPG7-208ENST00000563783 IRF4Q15306 451 aa25.36■■□□□ 1.65
SPG7-208ENST00000563783 LVRNQ6Q4G3 990 aa25.36■■□□□ 1.65
SPG7-208ENST00000563783 SNIP1Q8TAD8 396 aaKnown RBP25.36■■□□□ 1.65
SPG7-208ENST00000563783 DEPDC7Q96QD5 511 aa25.36■■□□□ 1.65
SPG7-208ENST00000563783 MBNL1Q9NR56 388 aaKnown RBP25.36■■□□□ 1.65
SPG7-208ENST00000563783 RCOR3Q9P2K3 495 aaPredicted RBP25.36■■□□□ 1.65
SPG7-208ENST00000563783 COL27A1Q8IZC6 1860 aaPredicted RBP25.36■■□□□ 1.65
SPG7-208ENST00000563783 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.35■■□□□ 1.65
SPG7-208ENST00000563783 SYCE3A1L190 88 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 EME2A4GXA9 379 aaPredicted RBP25.35■■□□□ 1.65
SPG7-208ENST00000563783 DFFAO00273 331 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 NEBLO76041 1014 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 HTR1BP28222 390 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 RPIAP49247 311 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 CLDN6P56747 220 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 PPARDQ03181 441 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 BCL2L1Q07817 233 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 MTM1Q13496 603 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 WSCD2Q2TBF2 565 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 RALGPS1Q5JS13 557 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 POLNQ7Z5Q5 900 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 LUZP1Q86V48 1076 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 CAMK1DQ8IU85 385 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 LRRC49Q8IUZ0 686 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 NETO2Q8NC67 525 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 WDR48Q8TAF3 677 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 NAT6Q93015 286 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 MYO1AQ9UBC5 1043 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 IP6K2Q9UHH9 426 aa25.35■■□□□ 1.65
SPG7-208ENST00000563783 FASNP49327 2511 aaKnown RBP25.34■■□□□ 1.65
SPG7-208ENST00000563783 IL1R2P27930 398 aa25.34■■□□□ 1.65
SPG7-208ENST00000563783 SERPINB6P35237 376 aa25.34■■□□□ 1.65
SPG7-208ENST00000563783 RGRP47804 291 aa25.34■■□□□ 1.65
SPG7-208ENST00000563783 LIG3P49916 1009 aa25.34■■□□□ 1.65
SPG7-208ENST00000563783 TMCO3Q6UWJ1 677 aa25.34■■□□□ 1.65
SPG7-208ENST00000563783 LMX1AQ8TE12 382 aa25.34■■□□□ 1.65
SPG7-208ENST00000563783 LRRC61Q9BV99 259 aa25.34■■□□□ 1.65
SPG7-208ENST00000563783 KCTD5Q9NXV2 234 aa25.34■■□□□ 1.65
SPG7-208ENST00000563783 LUC7L2Q9Y383 392 aaKnown RBP25.34■■□□□ 1.65
SPG7-208ENST00000563783 AK5Q9Y6K8 562 aa25.34■■□□□ 1.65
SPG7-208ENST00000563783 GOLGA6L19H0YKK7 550 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 TRAFD1O14545 582 aaPredicted RBP25.33■■□□□ 1.65
SPG7-208ENST00000563783 SOCS5O75159 536 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 CYP1A2P05177 515 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 ITIH2P19823 946 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 LBRQ14739 615 aaKnown RBP25.33■■□□□ 1.65
SPG7-208ENST00000563783 NFATC4Q14934 902 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 ELOCQ15369 112 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 NR0B2Q15466 257 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 COL28A1Q2UY09 1125 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 PRRT3Q5FWE3 981 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 C6orf132Q5T0Z8 1188 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 ZSWIM9Q86XI8 627 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 LSMEM2Q8N112 164 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 IFI44Q8TCB0 444 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 CSPG4P5Q96PW8 444 aa25.33■■□□□ 1.65
SPG7-208ENST00000563783 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.33■■□□□ 1.65
SPG7-208ENST00000563783 DXOO77932 396 aaKnown RBP25.32■■□□□ 1.64
SPG7-208ENST00000563783 ANXA6P08133 673 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 HOXC4P09017 264 aaPredicted RBP25.32■■□□□ 1.64
SPG7-208ENST00000563783 ALPIP09923 528 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 NFKBIAP25963 317 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 ACTN2P35609 894 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 HK3P52790 923 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 DPPA4Q7L190 304 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 PDZD3Q86UT5 571 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 RBFAQ8N0V3 343 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 BBS5Q8N3I7 341 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 FAM71BQ8TC56 605 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.32■■□□□ 1.64
SPG7-208ENST00000563783 ABCG4Q9H172 646 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 LCMT1Q9UIC8 334 aa25.32■■□□□ 1.64
SPG7-208ENST00000563783 RALYQ9UKM9 306 aaKnown RBP25.32■■□□□ 1.64
SPG7-208ENST00000563783 PNMA8BQ9ULN7 279 aaPredicted RBP25.32■■□□□ 1.64
SPG7-208ENST00000563783 HTRA2O43464 458 aaPredicted RBP25.31■■□□□ 1.64
SPG7-208ENST00000563783 GCATO75600 419 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 TCEA3O75764 348 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 RASGRP1O95267 797 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 RARAP10276 462 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 CR2P20023 1033 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 HNRNPH3P31942 346 aaKnown RBP25.31■■□□□ 1.64
SPG7-208ENST00000563783 EIF2S3P41091 472 aaKnown RBP25.31■■□□□ 1.64
SPG7-208ENST00000563783 SLC25A11Q02978 314 aaKnown RBP25.31■■□□□ 1.64
SPG7-208ENST00000563783 RALGDSQ12967 914 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 DEFB133Q30KQ1 61 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 FAXCQ5TGI0 409 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 C19orf48Q6RUI8 117 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 IGF2-ASQ6U949 168 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 ARHGAP36Q6ZRI8 547 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 MAPK15Q8TD08 544 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 SCG3Q8WXD2 468 aaKnown RBP25.31■■□□□ 1.64
SPG7-208ENST00000563783 FGF11Q92914 225 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 APOOQ9BUR5 198 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 THAP2Q9H0W7 228 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 DGKBQ9Y6T7 804 aa25.31■■□□□ 1.64
SPG7-208ENST00000563783 A0A087X0T9 212 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms