RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 BBS2Q9BXC9 721 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 ADGRE3Q9BY15 652 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 TRABDQ9H4I3 376 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 NEUROD4Q9HD90 331 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 SPHK2Q9NRA0 654 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 INTS9Q9NV88 658 aaKnown RBP9.79□□□□□ -0.84
UBFD1-202ENST00000563366 OBP2AQ9NY56 170 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 GDE1Q9NZC3 331 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 MARK1Q9P0L2 795 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 CTNNAL1Q9UBT7 734 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 VPS51Q9UID3 782 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 TCAF1Q9Y4C2 921 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 OR51B4Q9Y5P0 310 aa9.79□□□□□ -0.84
UBFD1-202ENST00000563366 DOCK6Q96HP0 2047 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 TRANK1O15050 2925 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.78□□□□□ -0.84
UBFD1-202ENST00000563366 FAM47DPA6NHR8 397 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 PRPF4O43172 522 aaKnown RBP eCLIP9.78□□□□□ -0.84
UBFD1-202ENST00000563366 ZMPSTE24O75844 475 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 ZWINTO95229 277 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 PRAMEF12O95522 483 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 NDST3O95803 873 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 C1QAP02745 245 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 MT-ND3P03897 115 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 MMP2P08253 660 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 CEBPBP17676 345 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 CR2P20023 1033 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 SPRP35270 261 aaPredicted RBP9.78□□□□□ -0.84
UBFD1-202ENST00000563366 GP5P40197 560 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 HADHAP40939 763 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 CSNK1DP48730 415 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 GYS2P54840 703 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 CRADDP78560 199 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 ARF5P84085 180 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 NIPAL4Q0D2K0 466 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 GRM3Q14832 879 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 POU6F1Q14863 301 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 PLEKHG6Q3KR16 790 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 FSCBQ5H9T9 825 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 CERCAMQ5T4B2 595 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 GRTP1Q5TC63 336 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 KIAA0930Q6ICG6 404 aaPredicted RBP9.78□□□□□ -0.84
UBFD1-202ENST00000563366 DENND5AQ6IQ26 1287 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 TMC5Q6UXY8 1006 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 LEKR1Q6ZMV7 388 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 TPGS1Q6ZTW0 290 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 KCNMB4Q86W47 210 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 ARID3BQ8IVW6 561 aaPredicted RBP9.78□□□□□ -0.84
UBFD1-202ENST00000563366 ETFBKMTQ8IXQ9 262 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 PGBD5Q8N414 524 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.78□□□□□ -0.84
UBFD1-202ENST00000563366 EFHBQ8N7U6 833 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 IRF7Q92985 503 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 ATP2A3Q93084 1043 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 ISG20Q96AZ6 181 aaKnown RBP9.78□□□□□ -0.84
UBFD1-202ENST00000563366 ALG14Q96F25 216 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 SRPK1Q96SB4 655 aaKnown RBP9.78□□□□□ -0.84
UBFD1-202ENST00000563366 APOL2Q9BQE5 337 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 FAM167BQ9BTA0 163 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 CERS4Q9HA82 394 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 ABCB8Q9NUT2 735 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 THG1LQ9NWX6 298 aaKnown RBP9.78□□□□□ -0.84
UBFD1-202ENST00000563366 LMCD1Q9NZU5 365 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 HACD3Q9P035 362 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 SLC25A13Q9UJS0 675 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 RIMKLBQ9ULI2 386 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 CCL26Q9Y258 94 aa9.78□□□□□ -0.84
UBFD1-202ENST00000563366 ZCWPW2A0A1B0GU75 182 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 TMEM120BA0PK00 339 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 NEDD8-MDP1E9PL57 170 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 TM9SF1O15321 606 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 TIMM44O43615 452 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 NDUFB5O43674 189 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 SOCS5O75159 536 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 NFATC1O95644 943 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 CRTAMO95727 393 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 IGSF6O95976 241 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 MZF1P28698 734 aaPredicted RBP9.77□□□□□ -0.85
UBFD1-202ENST00000563366 SCNN1BP51168 640 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 CSE1LP55060 971 aaKnown RBP9.77□□□□□ -0.85
UBFD1-202ENST00000563366 RPL26P61254 145 aaKnown RBP9.77□□□□□ -0.85
UBFD1-202ENST00000563366 GNGT1P63211 74 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 NTHL1P78549 312 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 LMAN2Q12907 356 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 EFTUD2Q15029 972 aaKnown RBP eCLIP9.77□□□□□ -0.85
UBFD1-202ENST00000563366 CYTH1Q15438 398 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 SEPT7Q16181 437 aaKnown RBP9.77□□□□□ -0.85
UBFD1-202ENST00000563366 SIRPB2Q5JXA9 342 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 TRMT10BQ6PF06 316 aaKnown RBP9.77□□□□□ -0.85
UBFD1-202ENST00000563366 KIAA0408Q6ZU52 694 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 GPR149Q86SP6 731 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 AHI1Q8N157 1196 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 ACMSDQ8TDX5 336 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 WFIKKN2Q8TEU8 576 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 OSCP1Q8WVF1 389 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 DYDC1Q8WWB3 177 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 ING5Q8WYH8 240 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 SMARCD2Q92925 531 aa9.77□□□□□ -0.85
UBFD1-202ENST00000563366 MRRFQ96E11 262 aaKnown RBP9.77□□□□□ -0.85
UBFD1-202ENST00000563366 CABS1Q96KC9 395 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms