RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TBL1XO60907 577 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 KLHL2O95198 593 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 NDST3O95803 873 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 CD160O95971 181 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 C1RP00736 705 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 EPOP01588 193 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 APOA4P06727 396 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 COL6A2P12110 1019 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 MZF1P28698 734 aaPredicted RBP19.22■□□□□ 0.67
SMPD3-203ENST00000563226 GJA8P48165 433 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 PPP3CCP48454 512 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 CYP4F8P98187 520 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 POU4F1Q01851 419 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 ACVR1Q04771 509 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 LONP2Q86WA8 852 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 SH3RF2Q8TEC5 729 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 CD248Q9HCU0 757 aa19.22■□□□□ 0.67
SMPD3-203ENST00000563226 INSIG1O15503 277 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 HSPA4LO95757 839 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 S1PR4O95977 384 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 GOT2P00505 430 aaKnown RBP19.21■□□□□ 0.67
SMPD3-203ENST00000563226 CHRNGP07510 517 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 RAG1P15918 1043 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 UBAP2LQ14157 1087 aaKnown RBP19.21■□□□□ 0.67
SMPD3-203ENST00000563226 SEMA3AQ14563 771 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 HERC6Q8IVU3 1022 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 CARNMT1Q8N4J0 409 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 RDH11Q8TC12 318 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 WFDC5Q8TCV5 224 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 HEXDCQ8WVB3 486 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 RAB3IPQ96QF0 476 aaPredicted RBP19.21■□□□□ 0.67
SMPD3-203ENST00000563226 IGSF5Q9NSI5 407 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 WBP1LQ9NX94 342 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 CPQQ9Y646 472 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 TGM5O43548 720 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 FGF18O76093 207 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 CNPP09543 421 aaKnown RBP19.21■□□□□ 0.67
SMPD3-203ENST00000563226 ALOX15P16050 662 aaPredicted RBP19.21■□□□□ 0.67
SMPD3-203ENST00000563226 CPA2P48052 419 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 IDH3AP50213 366 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 RASSF2P50749 326 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 CLCN5P51795 746 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 SLC12A2P55011 1212 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 RIPK1Q13546 671 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 HECTD2Q5U5R9 776 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 LIPMQ5VYY2 423 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 RINLQ6ZS11 566 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 LCA5Q86VQ0 697 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 HS6ST3Q8IZP7 471 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 AGR3Q8TD06 166 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 BRSK1Q8TDC3 778 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 BHMTQ93088 406 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 SIKE1Q9BRV8 207 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 CCDC106Q9BWC9 280 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 ZBP1Q9H171 429 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 SCUBE2Q9NQ36 999 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 MID2Q9UJV3 735 aa19.21■□□□□ 0.67
SMPD3-203ENST00000563226 CCDC162PA2VCL2 907 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 TMEM114B3SHH9 223 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 DLX3O60479 287 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 OLFM2O95897 454 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 PRLP01236 227 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 ENO1P06733 434 aaKnown RBP19.2■□□□□ 0.66
SMPD3-203ENST00000563226 PDHA1P08559 390 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 LINC00271P0C7V0 271 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 PRSS56P0CW18 603 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 GRIA4P48058 902 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 CSHL1Q14406 222 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 RFTN1Q14699 578 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-203ENST00000563226 GAREM2Q75VX8 874 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 SGF29Q96ES7 293 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 TLE6Q9H808 572 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-203ENST00000563226 DOCK6Q96HP0 2047 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 A0A087X1B8 175 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 KIAA0355O15063 1070 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 SERPINA6P08185 405 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 HDCP19113 662 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 CALB2P22676 271 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 MPSTP25325 297 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 CDKN2DP55273 166 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 Q6ZNB5 142 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 DDX50Q9BQ39 737 aaKnown RBP19.2■□□□□ 0.66
SMPD3-203ENST00000563226 TDRD1Q9BXT4 1180 aaKnown RBP19.2■□□□□ 0.66
SMPD3-203ENST00000563226 CADM1Q9BY67 442 aaKnown RBP19.2■□□□□ 0.66
SMPD3-203ENST00000563226 CDH19Q9H159 772 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 DNAJC28Q9NX36 388 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 CRYL1Q9Y2S2 319 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 PCDHGC4Q9Y5F7 938 aa19.2■□□□□ 0.66
SMPD3-203ENST00000563226 PRR5-ARHGAP8B1AHC4 643 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 H0Y626 953 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 GFRA2O00451 464 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 HNRNPCL1O60812 293 aaKnown RBP19.19■□□□□ 0.66
SMPD3-203ENST00000563226 CCDC22O60826 627 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 RPP40O75818 363 aaKnown RBP19.19■□□□□ 0.66
SMPD3-203ENST00000563226 ZMPSTE24O75844 475 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 TMCC1O94876 653 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 CSPG5O95196 566 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 ESRRAP11474 423 aaPredicted RBP19.19■□□□□ 0.66
SMPD3-203ENST00000563226 DNAJB1P25685 340 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms