RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 IHHQ14623 411 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 TRIP13Q15645 432 aaPredicted RBP18.94■□□□□ 0.62
RAB40C-207ENST00000563109 LRRC73Q5JTD7 316 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 CEP68Q76N32 757 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 KDELC2Q7Z4H8 507 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 ZSWIM9Q86XI8 627 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 FAM160A2Q8N612 972 aaPredicted RBP18.94■□□□□ 0.62
RAB40C-207ENST00000563109 OR2T34Q8NGX1 318 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 RMDN1Q96DB5 314 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 MLPHQ9BV36 600 aaPredicted RBP18.94■□□□□ 0.62
RAB40C-207ENST00000563109 FICDQ9BVA6 458 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 KCNH6Q9H252 994 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 LRRC40Q9H9A6 602 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 PREBQ9HCU5 417 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 WSB2Q9NYS7 404 aaPredicted RBP18.94■□□□□ 0.62
RAB40C-207ENST00000563109 FAM47DPA6NHR8 397 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 ERI2A8K979 691 aaKnown RBP18.93■□□□□ 0.62
RAB40C-207ENST00000563109 NDST3O95803 873 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 PDHA1P08559 390 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 CYP2A6P11509 494 aaPredicted RBP18.93■□□□□ 0.62
RAB40C-207ENST00000563109 ACSL1P33121 698 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 RPL6Q02878 288 aaKnown RBP18.93■□□□□ 0.62
RAB40C-207ENST00000563109 GPS1Q13098 491 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 GALNT3Q14435 633 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 CEP112Q8N8E3 955 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 ZBTB44Q8NCP5 570 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 PRSS33Q8NF86 280 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 MRGPRX2Q96LB1 330 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 GORASP1Q9BQQ3 440 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 GPR174Q9BXC1 333 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 ETNK1Q9HBU6 452 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 PCDH12Q9NPG4 1184 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 ASIC3Q9UHC3 531 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 FADS3Q9Y5Q0 445 aa18.93■□□□□ 0.62
RAB40C-207ENST00000563109 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TBC1D3DA0A087WVF3 549 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TBC1D3IA0A087WXS9 549 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TBC1D3EA0A087X179 549 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TBC1D3KA0A087X1G2 549 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 CTAGE15A4D2H0 777 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TBC1D3FA6NER0 549 aaPredicted RBP18.92■□□□□ 0.62
RAB40C-207ENST00000563109 PRR23AA6NEV1 266 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TBC1D3LB9A6J9 549 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 H0Y858 1186 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TSPAN6O43657 245 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 PCDH8O95206 1070 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 AP2A1O95782 977 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 EPOP01588 193 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TBC1D3HP0C7X1 549 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 CTAGE8P0CG41 777 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 HLA-DPA1P20036 260 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 PTPN5P54829 565 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 FAM193AP78312 1265 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 SEMA5AQ13591 1074 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 PTK6Q13882 451 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TBC1D3GQ6DHY5 549 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TBC1D3CQ6IPX1 549 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 NAPEPLDQ6IQ20 393 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 MAATS1Q7Z4T9 603 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 CTAGE6Q86UF2 777 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 CTAGE4Q8IX94 777 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TBC1D3Q8IZP1 549 aaPredicted RBP18.92■□□□□ 0.62
RAB40C-207ENST00000563109 CXorf40AQ8TE69 158 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 PIH1D2Q8WWB5 315 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TRIB3Q96RU7 358 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 TBL1YQ9BQ87 522 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 PCED1AQ9H1Q7 454 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 MBD1Q9UIS9 605 aaPredicted RBP18.92■□□□□ 0.62
RAB40C-207ENST00000563109 HCN4Q9Y3Q4 1203 aa18.92■□□□□ 0.62
RAB40C-207ENST00000563109 A0A0J9YYE9 177 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 LOC285095A0A1B0GVY8 99 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 CAPN8A6NHC0 703 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 RIOK3O14730 519 aaKnown RBP18.91■□□□□ 0.62
RAB40C-207ENST00000563109 AREL1O15033 823 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 PRLP01236 227 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 TRBC1P01850 177 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 PRKCGP05129 697 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 FGF1P05230 155 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 APRTP07741 180 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 CTPS1P17812 591 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 BCKDHBP21953 392 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 MMP12P39900 470 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 PTGIRP43119 386 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 TAS2R38P59533 333 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 SRSF5Q13243 272 aaKnown RBP18.91■□□□□ 0.62
RAB40C-207ENST00000563109 ELF2Q15723 593 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 QPCTQ16769 361 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 KIAA1161Q6NSJ0 714 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 NEK5Q6P3R8 708 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 DPPA4Q7L190 304 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 LPCAT2Q7L5N7 544 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 LINC00523Q86TU6 105 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 JAMLQ86YT9 394 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 KLHDC8BQ8IXV7 354 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 SLC25A41Q8N5S1 370 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 FRMD1Q8N878 549 aa18.91■□□□□ 0.62
RAB40C-207ENST00000563109 PDCD7Q8N8D1 485 aaKnown RBP18.91■□□□□ 0.62
RAB40C-207ENST00000563109 EIF2B3Q9NR50 452 aaKnown RBP18.91■□□□□ 0.62
RAB40C-207ENST00000563109 TPX2Q9ULW0 747 aaKnown RBP18.91■□□□□ 0.62
RAB40C-207ENST00000563109 ITM2BQ9Y287 266 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms