RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 RALGPS1Q5JS13 557 aa17.95■□□□□ 0.46
CMTM3-204ENST00000562357 TIGD7Q6NT04 549 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-204ENST00000562357 TP53INP2Q8IXH6 220 aa17.95■□□□□ 0.46
CMTM3-204ENST00000562357 ATL2Q8NHH9 583 aa17.95■□□□□ 0.46
CMTM3-204ENST00000562357 PDCD6IPQ8WUM4 868 aaKnown RBP17.95■□□□□ 0.46
CMTM3-204ENST00000562357 ECHDC3Q96DC8 303 aa17.95■□□□□ 0.46
CMTM3-204ENST00000562357 NUDCD1Q96RS6 583 aa17.95■□□□□ 0.46
CMTM3-204ENST00000562357 SPTLC3Q9NUV7 552 aa17.95■□□□□ 0.46
CMTM3-204ENST00000562357 UCKL1Q9NWZ5 548 aa17.95■□□□□ 0.46
CMTM3-204ENST00000562357 NLGN3Q9NZ94 848 aa17.95■□□□□ 0.46
CMTM3-204ENST00000562357 SPASTQ9UBP0 616 aa17.95■□□□□ 0.46
CMTM3-204ENST00000562357 ZMIZ1Q9ULJ6 1067 aa17.95■□□□□ 0.46
CMTM3-204ENST00000562357 TRIM38O00635 465 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 SCAMP1O15126 338 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 ELFN1P0C7U0 828 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 KRT10P13645 584 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 JUPP14923 745 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 BLKP51451 505 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 DUSP3P51452 185 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-204ENST00000562357 MMRN1Q13201 1228 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 DPYSL3Q14195 570 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 PROX2Q3B8N5 592 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 MACC1Q6ZN28 852 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 TP53I13Q8NBR0 393 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-204ENST00000562357 ZNF548Q8NEK5 533 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-204ENST00000562357 FAM71BQ8TC56 605 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 ZNF830Q96NB3 372 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-204ENST00000562357 CHP1Q99653 195 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 MGME1Q9BQP7 344 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 SLC13A1Q9BZW2 595 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 NCKIPSDQ9NZQ3 722 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 APOBEC3BQ9UH17 382 aaKnown RBP17.94■□□□□ 0.46
CMTM3-204ENST00000562357 COQ6Q9Y2Z9 468 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 CSNK1G3Q9Y6M4 447 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 DOCK9Q9BZ29 2069 aa17.94■□□□□ 0.46
CMTM3-204ENST00000562357 MUSKO15146 869 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 AQP9O43315 295 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 MFSD11O43934 449 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 CPP00450 1065 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 PRKCGP05129 697 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 CD48P09326 243 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 MX2P20592 715 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 ACP1P24666 158 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 ARHGAP25P42331 645 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 PEX5P50542 639 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 E2F1Q01094 437 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 PPARDQ03181 441 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 ITKQ08881 620 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 PAFAH1B3Q15102 231 aaKnown RBP17.93■□□□□ 0.46
CMTM3-204ENST00000562357 ANKRD20A8PQ5CZ79 823 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 FAXCQ5TGI0 409 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 SARM1Q6SZW1 724 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 ZSWIM9Q86XI8 627 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 SLC35G2Q8TBE7 412 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.93■□□□□ 0.46
CMTM3-204ENST00000562357 LMX1AQ8TE12 382 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 RFFLQ8WZ73 363 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 IL12RB2Q99665 862 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 CCDC86Q9H6F5 360 aaKnown RBP17.93■□□□□ 0.46
CMTM3-204ENST00000562357 USP29Q9HBJ7 922 aa17.93■□□□□ 0.46
CMTM3-204ENST00000562357 MBNL1Q9NR56 388 aaKnown RBP17.93■□□□□ 0.46
CMTM3-204ENST00000562357 LRRD1A4D1F6 860 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 PEX11BO96011 259 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 PCCBP05166 539 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 IL4RP24394 825 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 GARSP41250 739 aaKnown RBP17.92■□□□□ 0.46
CMTM3-204ENST00000562357 ARSEP51690 589 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 TAS2R40P59535 323 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 MAXP61244 160 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 GALNT2Q10471 571 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 MTM1Q13496 603 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 IFI16Q16666 785 aaKnown RBP17.92■□□□□ 0.46
CMTM3-204ENST00000562357 WSCD2Q2TBF2 565 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 ATP13A4Q4VNC1 1196 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 NCBP2-AS2Q69YL0 99 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 ZCCHC8Q6NZY4 707 aaKnown RBP17.92■□□□□ 0.46
CMTM3-204ENST00000562357 DPPA4Q7L190 304 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 PHACTR4Q8IZ21 702 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 NDUFAF2Q8N183 169 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 PCDH19Q8TAB3 1148 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 POLR1EQ9GZS1 481 aaKnown RBP17.92■□□□□ 0.46
CMTM3-204ENST00000562357 NOD2Q9HC29 1040 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 NT5MQ9NPB1 228 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 LUC7LQ9NQ29 371 aaKnown RBP17.92■□□□□ 0.46
CMTM3-204ENST00000562357 INTUQ9ULD6 942 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 DOLKQ9UPQ8 538 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 TTLL3Q9Y4R7 772 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 PCDHGC4Q9Y5F7 938 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 IGF2RP11717 2491 aa17.92■□□□□ 0.46
CMTM3-204ENST00000562357 FAM149AA5PLN7 773 aa17.91■□□□□ 0.46
CMTM3-204ENST00000562357 K7ESM1 405 aa17.91■□□□□ 0.46
CMTM3-204ENST00000562357 TRAFD1O14545 582 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-204ENST00000562357 HTRA2O43464 458 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-204ENST00000562357 RECQL5O94762 991 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-204ENST00000562357 CYP2A6P11509 494 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-204ENST00000562357 CR2P20023 1033 aa17.91■□□□□ 0.46
CMTM3-204ENST00000562357 CA4P22748 312 aa17.91■□□□□ 0.46
CMTM3-204ENST00000562357 SEMG2Q02383 582 aa17.91■□□□□ 0.46
CMTM3-204ENST00000562357 EIF2B5Q13144 721 aaKnown RBP17.91■□□□□ 0.46
CMTM3-204ENST00000562357 ACOX1Q15067 660 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms