RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CCNG2Q16589 344 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 LPAL2Q16609 132 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 CYP1B1Q16678 543 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 SYCP2LQ5T4T6 812 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 C12orf50Q8NA57 414 aaPredicted RBP13.51□□□□□ -0.25
CDH1-204ENST00000562118 CEP76Q8TAP6 659 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 ACTRT1Q8TDG2 376 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 GANCQ8TET4 914 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 MAIP1Q8WWC4 291 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 SCRN2Q96FV2 425 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 AGAP3Q96P47 875 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 KLF6Q99612 283 aaPredicted RBP13.51□□□□□ -0.25
CDH1-204ENST00000562118 FAM118BQ9BPY3 351 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 CEP41Q9BYV8 373 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 SUSD2Q9UGT4 822 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 GMEB2Q9UKD1 530 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 PHTF1Q9UMS5 762 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 ITM2BQ9Y287 266 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 DCHS1Q96JQ0 3298 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 LRP4O75096 1905 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 TBC1D3DA0A087WVF3 549 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 TBC1D3IA0A087WXS9 549 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 TBC1D3EA0A087X179 549 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 TBC1D3KA0A087X1G2 549 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 A0A0J9YYE9 177 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 LOC285095A0A1B0GVY8 99 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 A0A1W2PQU0 124 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 TBC1D3FA6NER0 549 aaPredicted RBP13.5□□□□□ -0.25
CDH1-204ENST00000562118 TBC1D3LB9A6J9 549 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 H7C0C1 242 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 FOXD2O60548 495 aaPredicted RBP13.5□□□□□ -0.25
CDH1-204ENST00000562118 GFRA3O60609 400 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 GCATO75600 419 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 CPP00450 1065 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 TRBC1P01850 177 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 FGGP02679 453 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 TBC1D3HP0C7X1 549 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 NFKB1P19838 968 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 CXCR5P32302 372 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 CD86P42081 329 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 ATP5OP48047 213 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 GRIA4P48058 902 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 GDF10P55107 478 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 CDKN3Q16667 212 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 ANKRD20A2Q5SQ80 823 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 ARMC12Q5T9G4 340 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 CCDC181Q5TID7 509 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 ANKRD20A1Q5TYW2 823 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 ANKRD20A3Q5VUR7 823 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 SEL1L3Q68CR1 1132 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 TBC1D3GQ6DHY5 549 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 TBC1D3CQ6IPX1 549 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 NYAP1Q6ZVC0 841 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 TTC7BQ86TV6 843 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 TBC1D3Q8IZP1 549 aaPredicted RBP13.5□□□□□ -0.25
CDH1-204ENST00000562118 GPR161Q8N6U8 529 aaKnown RBP13.5□□□□□ -0.25
CDH1-204ENST00000562118 PRELID2Q8N945 189 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 DENND6BQ8NEG7 585 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 COG1Q8WTW3 980 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 ATG4AQ8WYN0 398 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 FAM122AQ96E09 287 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 OXNAD1Q96HP4 312 aaPredicted RBP13.5□□□□□ -0.25
CDH1-204ENST00000562118 ARRDC1-AS1Q9H2J1 176 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 C10orf88Q9H8K7 445 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 DRG1Q9Y295 367 aaKnown RBP13.5□□□□□ -0.25
CDH1-204ENST00000562118 PCDHB9Q9Y5E1 797 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 ADAMTS9Q9P2N4 1935 aa13.5□□□□□ -0.25
CDH1-204ENST00000562118 MYLKQ15746 1914 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 A0A1B0GTW7 788 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 CAPN8A6NHC0 703 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 MEI4A8MW99 385 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 PRR5-ARHGAP8B1AHC4 643 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 PSMD11O00231 422 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 KCNN4O15554 427 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 ATXN1LP0C7T5 689 aaKnown RBP13.49□□□□□ -0.25
CDH1-204ENST00000562118 ITIH2P19823 946 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 CA4P22748 312 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 LHCGRP22888 699 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
CDH1-204ENST00000562118 STIP1P31948 543 aaKnown RBP13.49□□□□□ -0.25
CDH1-204ENST00000562118 ADRA1AP35348 466 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 RACK1P63244 317 aaKnown RBP13.49□□□□□ -0.25
CDH1-204ENST00000562118 BNC1Q01954 994 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 DUOXA1Q1HG43 343 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 P3H1Q32P28 736 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 SETMARQ53H47 684 aaPredicted RBP13.49□□□□□ -0.25
CDH1-204ENST00000562118 KCTD11Q693B1 232 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 NAPEPLDQ6IQ20 393 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 ERAP2Q6P179 960 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 DARS2Q6PI48 645 aaKnown RBP13.49□□□□□ -0.25
CDH1-204ENST00000562118 LIPIQ6XZB0 460 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 ARMCX6Q7L4S7 300 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 ABI3BPQ7Z7G0 1075 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 IQCHQ86VS3 1027 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 DEFB119Q8N690 84 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 SPATA22Q8NHS9 363 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 CENPTQ96BT3 561 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 FEM1CQ96JP0 617 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 MRGPRX2Q96LB1 330 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 RBM15Q96T37 977 aaKnown RBP eCLIP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms