RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 FAM45AQ8TCE6 357 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 NRCAMQ92823 1304 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 DUS3LQ96G46 650 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 RANBP9Q96S59 729 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 FBRSL1Q9HCM7 1045 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 VPS45Q9NRW7 570 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 SFMBT1Q9UHJ3 866 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 TRAF6Q9Y4K3 522 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 BMP2P12643 396 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ATP6V1B2P21281 511 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ARNTP27540 789 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 LILRA4P59901 499 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 TECRLQ5HYJ1 363 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 BTBD8Q5XKL5 378 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 WSCD1Q658N2 575 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ERMP1Q7Z2K6 904 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ERO1BQ86YB8 467 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 CAMK1DQ8IU85 385 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 BBS5Q8N3I7 341 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 PCYOX1LQ8NBM8 494 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 SHCBP1Q8NEM2 672 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 C12orf43Q96C57 262 aaKnown RBP14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 FSD1LQ9BXM9 530 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 RNF39Q9H2S5 420 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 IGSF5Q9NSI5 407 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 SMOXQ9NWM0 555 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 MTF2Q9Y483 593 aaPredicted RBP14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 TCAF1Q9Y4C2 921 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 PPP2R3BQ9Y5P8 575 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 CROCCQ5TZA2 2017 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 FAM155AB1AL88 458 aaPredicted RBP14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ANXA9O76027 345 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 UGT1A6P19224 532 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ETFBP38117 255 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ADCYAP1R1P41586 468 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ZBED5Q49AG3 693 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 SIK2Q9H0K1 926 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 EGFL7Q9UHF1 273 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 PIN4Q9Y237 131 aaKnown RBP14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ZNF510Q9Y2H8 683 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ZNF711Q9Y462 761 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 FZD9O00144 591 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 NR5A2O00482 541 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 GIPC1O14908 333 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 SUPT7LO94864 414 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 WARSP23381 471 aaKnown RBP14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 PFKPQ01813 784 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 KCTD21Q4G0X4 260 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 NEPROQ6NW34 567 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 GPRIN1Q7Z2K8 1008 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 SPPL2CQ8IUH8 684 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ATPAF2Q8N5M1 289 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 C2CD4AQ8NCU7 369 aaPredicted RBP14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 CYGBQ8WWM9 190 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 PPP1R14BQ96C90 147 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ADAMTS10Q9H324 1103 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 ARMC1Q9NVT9 282 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 HACD3Q9P035 362 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 CDC14AQ9UNH5 594 aa14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 MRPL42Q9Y6G3 142 aaKnown RBP14.05□□□□□ -0.16
VPS9D1-202ENST00000561976 FOXD2O60548 495 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 LTA4HP09960 611 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 IL10P22301 178 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 INPP5AQ14642 412 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 TAPT1Q6NXT6 567 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 PATL1Q86TB9 770 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 GPR180Q86V85 440 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 TNIP2Q8NFZ5 429 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 THAP11Q96EK4 314 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 PLEKHG4BQ96PX9 1271 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 OLFM1Q99784 485 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 ADI1Q9BV57 179 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 GLOD4Q9HC38 313 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 A0A0G2JLL6 359 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 DHRS12A0PJE2 317 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 SH3PXD2BA1X283 911 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 F9P00740 461 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 RBP1P09455 135 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 TPP2P29144 1249 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 CHRNA4P43681 627 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 GEN1Q17RS7 908 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 ZNF789Q5FWF6 425 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 IL31Q6EBC2 164 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 DENND5AQ6IQ26 1287 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 DHRS4L2Q6PKH6 230 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 PRRT2Q7Z6L0 340 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 LRCH3Q96II8 777 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 RHOBTB2Q9BYZ6 727 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 TRIM15Q9C019 465 aa14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 TUBA8Q9NY65 449 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 RGS17Q9UGC6 210 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-202ENST00000561976 GEMP55040 296 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 MERTKQ12866 999 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 HACD2Q6Y1H2 254 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 TOP6BLQ8N6T0 577 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 PNPLA1Q8N8W4 532 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 SMYD1Q8NB12 490 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 ROPN1LQ96C74 230 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 FCRL5Q96RD9 977 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms