RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CCNHP51946 323 aaPredicted RBP10.37□□□□□ -0.75
USP3-219ENST00000561326 KDSRQ06136 332 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 TRAF2Q12933 501 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 GALNT3Q14435 633 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 IHHQ14623 411 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 TAF1AQ15573 450 aaPredicted RBP10.37□□□□□ -0.75
USP3-219ENST00000561326 AAK1Q2M2I8 961 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 TSTD2Q5T7W7 516 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 PDPK2PQ6A1A2 396 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 DPY19L3Q6ZPD9 716 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 SLC26A11Q86WA9 606 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 CAMK1DQ8IU85 385 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 DEFB123Q8N688 67 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 PPM1NQ8N819 430 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 LPCAT1Q8NF37 534 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 TTC8Q8TAM2 541 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 CALML6Q8TD86 181 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 BLOC1S5Q8TDH9 187 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 STYXQ8WUJ0 223 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 SLC44A1Q8WWI5 657 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 SORCS1Q8WY21 1168 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 CERS2Q96G23 380 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 MYO19Q96H55 970 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 MRGPRX3Q96LB0 322 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 OSBPL1AQ9BXW6 950 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 C8orf33Q9H7E9 229 aaPredicted RBP10.37□□□□□ -0.75
USP3-219ENST00000561326 MAGEE1Q9HCI5 957 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 C20orf96Q9NUD7 363 aaPredicted RBP10.37□□□□□ -0.75
USP3-219ENST00000561326 ZFATQ9P243 1243 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 PSMC3IPQ9P2W1 217 aaPredicted RBP10.37□□□□□ -0.75
USP3-219ENST00000561326 LIMD1Q9UGP4 676 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 LGALS13Q9UHV8 139 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 PHTF1Q9UMS5 762 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 IQANK1A0A1B0GTG1 560 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 TTC34A8MYJ7 566 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 C2CD4DB7Z1M9 353 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 PRRT4C9JH25 899 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 ARNTLO00327 626 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 HTRA2O43464 458 aaPredicted RBP10.36□□□□□ -0.75
USP3-219ENST00000561326 FZD6O60353 706 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 RNF40O75150 1001 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 KRT37O76014 449 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 KRT38O76015 456 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 PDHA1P08559 390 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 GLULP15104 373 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 KRT15P19012 456 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 LPOP22079 712 aaPredicted RBP10.36□□□□□ -0.75
USP3-219ENST00000561326 CNTFP26441 200 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 NMBRP28336 390 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 GALK1P51570 392 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 PRAMEP78395 509 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 PFKPQ01813 784 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 ILF2Q12905 390 aaKnown RBP10.36□□□□□ -0.75
USP3-219ENST00000561326 THOC5Q13769 683 aaKnown RBP10.36□□□□□ -0.75
USP3-219ENST00000561326 SMAD2Q15796 467 aaKnown RBP10.36□□□□□ -0.75
USP3-219ENST00000561326 CNGA3Q16281 694 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 LEXMQ3ZCV2 418 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 UBAP2Q5T6F2 1119 aaKnown RBP10.36□□□□□ -0.75
USP3-219ENST00000561326 CES3Q6UWW8 571 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 SERPINA13PQ6UXR4 307 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 GDPD4Q6W3E5 623 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 Q6ZVU0 165 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 Q7L0L9 218 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 DSG4Q86SJ6 1040 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 RASSF3Q86WH2 238 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 RALGPS2Q86X27 583 aaPredicted RBP10.36□□□□□ -0.75
USP3-219ENST00000561326 LMNTD2Q8IXW0 634 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 PHTF2Q8N3S3 785 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 SLC44A3Q8N4M1 653 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 ARFGAP2Q8N6H7 521 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 OR2A12Q8NGT7 310 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 OR6K2Q8NGY2 324 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 HCAR2Q8TDS4 363 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 FRS2Q8WU20 508 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 SPOCK2Q92563 424 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 ARL8AQ96BM9 186 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 ZBTB9Q96C00 473 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 MRRFQ96E11 262 aaKnown RBP10.36□□□□□ -0.75
USP3-219ENST00000561326 MFSD3Q96ES6 412 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 FCRL3Q96P31 734 aaPredicted RBP10.36□□□□□ -0.75
USP3-219ENST00000561326 PAFAH2Q99487 392 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 P2RY13Q9BPV8 354 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 ZDHHC6Q9H6R6 413 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 KCNK12Q9HB15 430 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.36□□□□□ -0.755e-6■■■□□ 19.1
USP3-219ENST00000561326 SENP1Q9P0U3 644 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 IL36AQ9UHA7 158 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 TBK1Q9UHD2 729 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 ZNF180Q9UJW8 692 aa10.36□□□□□ -0.75
USP3-219ENST00000561326 NOVA2Q9UNW9 492 aaKnown RBP10.36□□□□□ -0.75
USP3-219ENST00000561326 ZCWPW2A0A1B0GU75 182 aa10.35□□□□□ -0.75
USP3-219ENST00000561326 TRAFD1O14545 582 aaPredicted RBP10.35□□□□□ -0.75
USP3-219ENST00000561326 STX7O15400 261 aaKnown RBP10.35□□□□□ -0.75
USP3-219ENST00000561326 SLC7A4O43246 635 aa10.35□□□□□ -0.75
USP3-219ENST00000561326 LDB2O43679 373 aa10.35□□□□□ -0.75
USP3-219ENST00000561326 VAPBO95292 243 aa10.35□□□□□ -0.75
USP3-219ENST00000561326 PRNPP04156 253 aa10.35□□□□□ -0.75
USP3-219ENST00000561326 UGT2B4P06133 528 aa10.35□□□□□ -0.75
USP3-219ENST00000561326 SNRPAP09012 282 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms