RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 GPR182O15218 404 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 KLHL41O60662 606 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 MLNP12872 115 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 KCNA4P22459 653 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 MYF6P23409 242 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 PCYT1AP49585 367 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 AIF1P55008 147 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 PDE1CQ14123 709 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 OXA1LQ15070 435 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 PHKG1Q16816 387 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 NHSL2Q5HYW2 709 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 AARS2Q5JTZ9 985 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 MFSD4BQ5TF39 518 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 VWA5B1Q5TIE3 1220 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 MFSD14CQ5VZR4 134 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 PPP4R4Q6NUP7 873 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 TRMT10BQ6PF06 316 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 TTC33Q6PID6 262 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 C10orf107Q8IVU9 208 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 CNTD1Q8N815 330 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 ANKFN1Q8N957 763 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 FAM47BQ8NA70 645 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 COLGALT1Q8NBJ5 622 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 TRIB2Q92519 343 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 NTAN1Q96AB6 310 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 EFCAB1Q9HAE3 211 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 WDR6Q9NNW5 1121 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 C8orf4Q9NR00 106 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 EIF2B3Q9NR50 452 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 MYO18AQ92614 2054 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 USP17L7P0C7H9 530 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 NKX3-2P78367 333 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 RHDQ02161 417 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 SCAPQ12770 1279 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 TRAP1Q12931 704 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 ART3Q13508 389 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 UPP1Q16831 310 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 TIGD5Q53EQ6 642 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 STEAP4Q687X5 459 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 ADAM32Q8TC27 787 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 PAAF1Q9BRP4 392 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 TRPV6Q9H1D0 765 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 PRDM12Q9H4Q4 367 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 ERVK-11Q9UQG0 969 aa14.06□□□□□ -0.16
RABGGTA-220ENST00000560998 A0A1W2PPW3 197 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 F5H423 210 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 FAM72CH0Y354 149 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 I6L893 689 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 AKAP10O43572 662 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 HSPA4LO95757 839 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 C7P10643 843 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 PCSK1P29120 753 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 SLC7A1P30825 629 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 TMBIM6P55061 237 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 CDH15P55291 814 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 SEMA3BQ13214 749 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 FAM72AQ5TYM5 149 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 FAM72DQ6L9T8 149 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 XKR5Q6UX68 686 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 BHLHA9Q7RTU4 235 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 FAM72BQ86X60 149 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 MYO1HQ8N1T3 1032 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 PNPT1Q8TCS8 783 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 GRIN3AQ8TCU5 1115 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 PTCD2Q8WV60 388 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 RCN3Q96D15 328 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 PGAP3Q96FM1 320 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 SMARCD1Q96GM5 515 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 RTP3Q9BQQ7 232 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 YTHDF1Q9BYJ9 559 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 ZNF385DQ9H6B1 395 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 SPC25Q9HBM1 224 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 MRGBPQ9NV56 204 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 KLHL3Q9UH77 587 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 FBXW11Q9UKB1 542 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 MGEA5O60502 916 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 VAPBO95292 243 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 LTFP02788 710 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 AMHP03971 560 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 RPLP2P05387 115 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 CD52P31358 61 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 SERPINB5P36952 375 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 NME5P56597 212 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 ATP6V0D1P61421 351 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 NFATC3Q12968 1075 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 RAB39AQ14964 217 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 CYP2A13Q16696 494 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 ARL13BQ3SXY8 428 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 SLC9B1Q4ZJI4 515 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 AGAP7PQ5VUJ5 663 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 TP53INP2Q8IXH6 220 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 CCNYQ8ND76 341 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 CEP41Q9BYV8 373 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 CSNK1G1Q9HCP0 422 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 DUS2Q9NX74 493 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 MOCS1Q9NZB8 636 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 SEPT10Q9P0V9 454 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 PACSIN3Q9UKS6 424 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 GABRQQ9UN88 632 aa14.05□□□□□ -0.16
RABGGTA-220ENST00000560998 WDR27A2RRH5 827 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms