RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 SYPL2Q5VXT5 272 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 NKAIN2Q5VXU1 208 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 JMJD6Q6NYC1 403 aaPredicted RBP9.62□□□□□ -0.87
HERC1-210ENST00000560897 CNNM4Q6P4Q7 775 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 TMEM71Q6P5X7 295 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 ZNF438Q7Z4V0 828 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 TTC7BQ86TV6 843 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 SFTPA2Q8IWL1 248 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 IQUBQ8NA54 791 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 FBXL13Q8NEE6 735 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 OR56A4Q8NGH8 313 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 ZDHHC1Q8WTX9 485 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 TMEM174Q8WUU8 243 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 SLC35F5Q8WV83 523 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 STAMBPL1Q96FJ0 436 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 C7orf25Q9BPX7 421 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 SPON2Q9BUD6 331 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 WRAP53Q9BUR4 548 aaKnown RBP9.62□□□□□ -0.87
HERC1-210ENST00000560897 OSBPL1AQ9BXW6 950 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 TM6SF2Q9BZW4 377 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 ZSCAN16Q9H4T2 348 aaPredicted RBP9.62□□□□□ -0.87
HERC1-210ENST00000560897 CROTQ9UKG9 612 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 PCDHGA9Q9Y5G4 932 aaKnown RBP9.62□□□□□ -0.87
HERC1-210ENST00000560897 CROCCQ5TZA2 2017 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 KRIT1O00522 736 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 PDXKO00764 312 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 UGT2B4P06133 528 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 GTF2H1P32780 548 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 IRAK1P51617 712 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 CDK17Q00537 523 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 CDK18Q07002 472 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 SLC20A2Q08357 652 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 PEX6Q13608 980 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 INPP5AQ14642 412 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 NR1D2Q14995 579 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 STILQ15468 1287 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 CHRNA6Q15825 494 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 LRRC73Q5JTD7 316 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 C6orf15Q6UXA7 325 aaPredicted RBP9.61□□□□□ -0.87
HERC1-210ENST00000560897 BEND5Q7L4P6 421 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 LYSMD3Q7Z3D4 306 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 SETD3Q86TU7 594 aaPredicted RBP9.61□□□□□ -0.87
HERC1-210ENST00000560897 TMEM135Q86UB9 458 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 HPS6Q86YV9 775 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 BMPERQ8N8U9 685 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 OR6K2Q8NGY2 324 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 SEC14L1Q92503 715 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 PNPLA2Q96AD5 504 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 EEF2KMTQ96G04 330 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 GSDMCQ9BYG8 508 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 TRIM55Q9BYV6 548 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 ULBP3Q9BZM4 244 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 SPRY4Q9C004 299 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 TMEM168Q9H0V1 697 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 BLZF1Q9H2G9 400 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 MAGEF1Q9HAY2 307 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 POPDC2Q9HBU9 364 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 FBXO8Q9NRD0 319 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 DDIT4Q9NX09 232 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 RAB20Q9NX57 234 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 SMC3Q9UQE7 1217 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 FCF1Q9Y324 198 aaKnown RBP9.61□□□□□ -0.87
HERC1-210ENST00000560897 PCDHGB7Q9Y5F8 929 aa9.61□□□□□ -0.87
HERC1-210ENST00000560897 PCSK5Q92824 1860 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 PVALEFA0A1B0GWK0 134 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 A8MU76 341 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 AREL1O15033 823 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 STX10O60499 249 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 CREG1O75629 220 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 RHOBTB3O94955 611 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 CBX6O95503 412 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 DLGAP3O95886 979 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 HSP90AA1P07900 732 aaKnown RBP9.6□□□□□ -0.87
HERC1-210ENST00000560897 FURINP09958 794 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 PDIA4P13667 645 aaKnown RBP9.6□□□□□ -0.87
HERC1-210ENST00000560897 TIMP2P16035 220 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 F8A1P23610 371 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 ITGA3P26006 1051 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 CSF2RBP32927 897 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 PTGER4P35408 488 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 GGCXP38435 758 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 ACADSBP45954 432 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 CCL11P51671 97 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 SNRPD1P62314 119 aaKnown RBP9.6□□□□□ -0.87
HERC1-210ENST00000560897 GPLD1P80108 840 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 DNM1Q05193 864 aaKnown RBP9.6□□□□□ -0.87
HERC1-210ENST00000560897 ILF3Q12906 894 aaKnown RBP eCLIP9.6□□□□□ -0.87
HERC1-210ENST00000560897 MTM1Q13496 603 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 CUL2Q13617 745 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 RAPGEF1Q13905 1077 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 POLD3Q15054 466 aaPredicted RBP9.6□□□□□ -0.87
HERC1-210ENST00000560897 LRRC31Q6UY01 552 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 SLC47A2Q86VL8 602 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 RHOT1Q8IXI2 618 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 FAM186BQ8IYM0 893 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 IQCKQ8N0W5 287 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 MMP21Q8N119 569 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 OR10G6Q8NH81 332 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 OR1E3Q8WZA6 343 aa9.6□□□□□ -0.87
HERC1-210ENST00000560897 SEMA4DQ92854 862 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms