RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CHPT1Q8WUD6 406 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 SCFD1Q8WVM8 642 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 PANX3Q96QZ0 392 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 CYTH2Q99418 400 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 SPZ1Q9BXG8 430 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 LY9Q9HBG7 655 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 TLR8Q9NR97 1041 aaKnown RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 CLDND1Q9NY35 253 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 TRPC5Q9UL62 973 aaPredicted RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 SATB2Q9UPW6 733 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 MYH6P13533 1939 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 ZNF804BA4D1E1 1349 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 A0A1W2PRV1 198 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 FOXO6A8MYZ6 492 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 UBXN8O00124 270 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 BNIP3LO60238 219 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 BBOX1O75936 387 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 SUPT20HL2P0C7V6 817 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 HK3P52790 923 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 FOLH1Q04609 750 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 BFSP1Q12934 665 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 NONOQ15233 471 aaKnown RBP eCLIP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 KCNJ8Q15842 424 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 PDK4Q16654 411 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 SUPT20HL1Q3ZLR7 823 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 DUSP28Q4G0W2 176 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 BOLA3Q53S33 107 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 DCAF6Q58WW2 860 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 LIAT1Q6ZQX7 453 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 GLRX5Q86SX6 157 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 NLRX1Q86UT6 975 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 SYCE1Q8N0S2 351 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 DCBLD1Q8N8Z6 715 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 DEPDC1BQ8WUY9 529 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 ART4Q93070 314 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 DMRTA2Q96SC8 542 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 REEP2Q9BRK0 252 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 PLVAPQ9BX97 442 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 C17orf75Q9HAS0 396 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 PARVGQ9HBI0 331 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 ACTR3BQ9P1U1 418 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 EPS15L1Q9UBC2 864 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 PTBP2Q9UKA9 531 aaKnown RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 NEU2Q9Y3R4 380 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 HEMK1Q9Y5R4 338 aaPredicted RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 MAD1L1Q9Y6D9 718 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 AQP9O43315 295 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 SLC25A17O43808 307 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 FARP2O94887 1054 aaPredicted RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 TNFAIP8O95379 198 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 HMOX2P30519 316 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 GP5P40197 560 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 CETN2P41208 172 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 KRT17Q04695 432 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 KCNAB1Q14722 419 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 ZNF829Q3KNS6 432 aaPredicted RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 EARS2Q5JPH6 523 aaKnown RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 TMEM63BQ5T3F8 832 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 PRAMEF9Q5VWM5 478 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 TTC23LQ6PF05 361 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 DRICH1Q6PGQ1 229 aaPredicted RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 KLHL24Q6TFL4 600 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 ITIH5Q86UX2 942 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 NT5DC3Q86UY8 548 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 SRRM1Q8IYB3 904 aaKnown RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 AGBL5Q8NDL9 886 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 CCDC110Q8TBZ0 833 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 DENND1AQ8TEH3 1009 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 NEIL1Q96FI4 390 aaPredicted RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 KLHDC7BQ96G42 594 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 MED30Q96HR3 178 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 UIMC1Q96RL1 719 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 PIP5K1AQ99755 562 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 NUP85Q9BW27 656 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 PCDHAC1Q9H158 963 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 CRISPLD1Q9H336 500 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 CDC42EP4Q9H3Q1 356 aaKnown RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 POLR3BQ9NW08 1133 aaPredicted RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 CCNL1Q9UK58 526 aaPredicted RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 TBX20Q9UMR3 447 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 SMG5Q9UPR3 1016 aaKnown RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 ERVK-11Q9UQG0 969 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 RBMX2Q9Y388 322 aaKnown RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 PTRH2Q9Y3E5 179 aaKnown RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 TRPV2Q9Y5S1 764 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 CCDC88AQ3V6T2 1871 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 ARHGEF37A1IGU5 675 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 FAM25EA8MYX2 175 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 RSPH10B2B2RC85 870 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 TXNDC9O14530 226 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 MCF2LO15068 1137 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 GSTA4O15217 222 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 SPINT1O43278 529 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 PEX1O43933 1283 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 ACSL3O95573 720 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 ANXA2P07355 339 aaKnown RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 RSPH10BP0C881 870 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 TCEA1P23193 301 aaKnown RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 GABRB3P28472 473 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms