RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	USP13	Q92995	863 aa	Predicted RBP	3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	ZNF385A	Q96PM9	386 aa	Known RBP	3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	TWNK	Q96RR1	684 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	CLSTN3	Q9BQT9	956 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	NPL	Q9BXD5	320 aa	Predicted RBP	3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	NOD2	Q9HC29	1040 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	GDA	Q9Y2T3	454 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	RRP7A	Q9Y3A4	280 aa	Known RBP	3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	KIF1C	O43896	1103 aa	Known RBP	3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	HBP1	O60381	514 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	CBX6	O95503	412 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	ADA	P00813	363 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	SERPINC1	P01008	464 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	RNF224	P0DH78	156 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	DCTD	P32321	178 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	PAPOLA	P51003	745 aa	Known RBP	3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	SLC18A2	Q05940	514 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	CALCRL	Q16602	461 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	ME3	Q16798	604 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	FBXO43	Q4G163	708 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	FOXL2NB	Q6ZUU3	175 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	TBC1D22A	Q8WUA7	517 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	COG8	Q96MW5	612 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	PYM1	Q9BRP8	204 aa	Known RBP	3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	LMAN2L	Q9H0V9	348 aa		3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	STN1	Q9H668	368 aa	Known RBP	3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	TTC12	Q9H892	705 aa	Predicted RBP	3.54	□□□□□ -1.84
SLTM-223	ENST00000560532	WDR6	Q9NNW5	1121 aa	Known RBP	3.54	□□□□□ -1.84
SLTM-223	ENST00000560532		A0A096LPK6	155 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	3.53	□□□□□ -1.84
SLTM-223	ENST00000560532		J3KR12	359 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	VNN2	O95498	520 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	IGHV4-30-4	P0DP06	118 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	FGF5	P12034	268 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	GPR12	P47775	334 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	CENPA	P49450	140 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	PPFIA1	Q13136	1202 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	ANKRD1	Q15327	319 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	SLC18A3	Q16572	532 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	MAP3K21	Q5TCX8	1036 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	ANKRD45	Q5TZF3	282 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	NCAPH2	Q6IBW4	605 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	BBS12	Q6ZW61	710 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	ZNF441	Q8N8Z8	693 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	MCPH1	Q8NEM0	835 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	ZMIZ2	Q8NF64	920 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	TAS1R2	Q8TE23	839 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	TMEM170A	Q8WVE7	144 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	HERVK_113	Q902F9	699 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	SH3KBP1	Q96B97	665 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	OR1F2P	Q96R84	312 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	REEP2	Q9BRK0	252 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	MVB12B	Q9H7P6	319 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	PPCS	Q9HAB8	311 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	TCF19	Q9Y242	345 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532	PAM16	Q9Y3D7	125 aa		3.53	□□□□□ -1.84
SLTM-223	ENST00000560532		A0A1W2PNU3	283 aa	Predicted RBP	3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	FGF17	O60258	216 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	ZNF500	O60304	480 aa	Predicted RBP	3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	CHRM4	P08173	479 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	CTPS1	P17812	591 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	CD72	P21854	359 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	CDKN1A	P38936	164 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	ARSF	P54793	590 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	PMP22	Q01453	160 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	GOLGA8F	Q08AF8	430 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	TBL3	Q12788	808 aa	Known RBP	3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	CAPS	Q13938	189 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	FAM69B	Q5VUD6	431 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	SLC26A9	Q7LBE3	791 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	CPO	Q8IVL8	374 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	AADAT	Q8N5Z0	425 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	KBTBD3	Q8NAB2	608 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	LSM14A	Q8ND56	463 aa	Known RBP	3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	RAB40A	Q8WXH6	277 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	TRIB2	Q92519	343 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	PHF7	Q9BWX1	381 aa	Predicted RBP	3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	LRRC4	Q9HBW1	653 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	CNPY2	Q9Y2B0	182 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	SNX9	Q9Y5X1	595 aa		3.52	□□□□□ -1.85
SLTM-223	ENST00000560532	ADGRF5	Q8IZF2	1346 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	hDV102S1	A0JD36	115 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	CBY3	A6NI87	242 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	SH2D7	A6NKC9	451 aa	Predicted RBP	3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	FAM72C	H0Y354	149 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	KLK10	O43240	276 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	TSPAN3	O60637	253 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	KDM4B	O94953	1096 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	CLDN14	O95500	239 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	IL1A	P01583	271 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	ATP1A1	P05023	1023 aa	Known RBP	3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	TTK	P33981	857 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	CCR5	P51681	352 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	CLCN3	P51790	818 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	FAM27E3	Q08E93	113 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	ZBTB17	Q13105	803 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	LPIN1	Q14693	890 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	ACCSL	Q4AC99	568 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	WDR45B	Q5MNZ6	344 aa		3.51	□□□□□ -1.85
SLTM-223	ENST00000560532	FAM72A	Q5TYM5	149 aa		3.51	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms