RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 STX2P32856 288 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 USP8P40818 1118 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 PTPN9P43378 593 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 MVDP53602 400 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 BYSLQ13895 437 aaKnown RBP2.63□□□□□ -1.99
SPG11-222ENST00000560435 IL13RA2Q14627 380 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 AP5B1Q2VPB7 878 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 WDR73Q6P4I2 378 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 ZNF852Q6ZMS4 543 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 KRBA2Q6ZNG9 492 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 APLFQ8IW19 511 aaPredicted RBP2.63□□□□□ -1.99
SPG11-222ENST00000560435 FAM186BQ8IYM0 893 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 OR2C3Q8N628 320 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 SETD9Q8NE22 299 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 TMEM170AQ8WVE7 144 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 CDCA5Q96FF9 252 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 TRIM15Q9C019 465 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 ERVMER34-1Q9H9K5 563 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 FKRPQ9H9S5 495 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 PCDH9Q9HC56 1237 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 MCM9Q9NXL9 1143 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 FAM50BQ9Y247 325 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 COL5A2P05997 1499 aaPredicted RBP2.63□□□□□ -1.99
SPG11-222ENST00000560435 PDS5AQ29RF7 1337 aaKnown RBP2.63□□□□□ -1.99
SPG11-222ENST00000560435 AQP12BA6NM10 295 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 HBP1O60381 514 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 NDUFB4O95168 129 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 METTL18O95568 372 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 ATF3P18847 181 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 SERPINA4P29622 427 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 HOXA1P49639 335 aaPredicted RBP2.62□□□□□ -1.99
SPG11-222ENST00000560435 ARSFP54793 590 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 HDAC4P56524 1084 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 RPS6KA2Q15349 733 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 RUNDC3AQ59EK9 446 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 KCNT1Q5JUK3 1230 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 PDSS1Q5T2R2 415 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 KCTD8Q6ZWB6 473 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 ZNF440Q8IYI8 595 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 MAGEC3Q8TD91 643 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 STYXQ8WUJ0 223 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 TMEM190Q8WZ59 177 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 NCSTNQ92542 709 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 KIAA1191Q96A73 305 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 LINC00479Q96M42 142 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 OPRPNQ99935 248 aaPredicted RBP2.62□□□□□ -1.99
SPG11-222ENST00000560435 NAA15Q9BXJ9 866 aaKnown RBP2.62□□□□□ -1.99
SPG11-222ENST00000560435 ELAC1Q9H777 363 aaKnown RBP2.62□□□□□ -1.99
SPG11-222ENST00000560435 C17orf75Q9HAS0 396 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 TMEM30AQ9NV96 361 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 NDUFAF4Q9P032 175 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.62□□□□□ -1.99
SPG11-222ENST00000560435 ZNF624Q9P2J8 865 aaPredicted RBP2.62□□□□□ -1.99
SPG11-222ENST00000560435 NDRG3Q9UGV2 375 aa2.62□□□□□ -1.99
SPG11-222ENST00000560435 ZNF318Q5VUA4 2279 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 HHLA1C9JL84 531 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 EBAG9O00559 213 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 ARHGEF9O43307 516 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 RGS11O94810 467 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 ITGA2P17301 1181 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 GPTP24298 496 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 CHRNB4P30926 498 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 TMPOP42166 694 aaKnown RBP2.61□□□□□ -1.99
SPG11-222ENST00000560435 TM4SF4P48230 202 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 ARHGAP8P85298 464 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 LRRC24Q50LG9 513 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 SFMBT2Q5VUG0 894 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 FAAP20Q6NZ36 180 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 SLC27A1Q6PCB7 646 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 ANKRD52Q8NB46 1076 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 WDR20Q8TBZ3 569 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 FAM71BQ8TC56 605 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 SLC20A1Q8WUM9 679 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 TSR2Q969E8 191 aaKnown RBP2.61□□□□□ -1.99
SPG11-222ENST00000560435 ART5Q96L15 291 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 CERS4Q9HA82 394 aa2.61□□□□□ -1.99
SPG11-222ENST00000560435 IFT80Q9P2H3 777 aaPredicted RBP2.61□□□□□ -1.99
SPG11-222ENST00000560435 FAF1Q9UNN5 650 aaPredicted RBP2.61□□□□□ -1.99
SPG11-222ENST00000560435 FAM90A20PA6NIJ5 464 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 SMIM1B2RUZ4 78 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 AKR1B15C9JRZ8 316 aaPredicted RBP2.6□□□□□ -1.99
SPG11-222ENST00000560435 PMM2O15305 246 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 TNFRSF6BO95407 300 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 ADAP00813 363 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 DCTP40126 519 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 PNPLA4P41247 253 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 THOC5Q13769 683 aaKnown RBP2.6□□□□□ -1.99
SPG11-222ENST00000560435 COBLL1Q53SF7 1204 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 XKR6Q5GH73 641 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 TRNP1Q6NT89 227 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 GJB7Q6PEY0 223 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 SYNE3Q6ZMZ3 975 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 C15orf39Q6ZRI6 1047 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 SLC44A2Q8IWA5 706 aaPredicted RBP2.6□□□□□ -1.99
SPG11-222ENST00000560435 WDR63Q8IWG1 891 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 AMER3Q8N944 861 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 TRIM58Q8NG06 486 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms