RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 KYQ8NBH2 561 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 DENND6BQ8NEG7 585 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 GPBAR1Q8TDU6 330 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 CLEC4CQ8WTT0 213 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 SSC4DQ8WTU2 575 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 MIB2Q96AX9 1013 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 C16orf45Q96MC5 204 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-215ENST00000560424 AGPAT1Q99943 283 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 LRRC61Q9BV99 259 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 C2orf49Q9BVC5 232 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-215ENST00000560424 HDAC8Q9BY41 377 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 ISCUQ9H1K1 167 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 TCEAL2Q9H3H9 227 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-215ENST00000560424 XPO7Q9UIA9 1087 aaKnown RBP9.43□□□□□ -0.9
SMAD3-215ENST00000560424 KIAA1257Q9ULG3 409 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 GPR34Q9UPC5 381 aa9.43□□□□□ -0.9
SMAD3-215ENST00000560424 A0A1W2PQM1 296 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 ZNF891A8MT65 544 aaPredicted RBP9.42□□□□□ -0.9
SMAD3-215ENST00000560424 C9orf172C9J069 976 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 M0QYV0 167 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 RAD51BO15315 384 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 SPINT1O43278 529 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 KRT38O76015 456 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 KRT7P08729 469 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 PAEPP09466 180 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 PNMA6AP0CW24 399 aaPredicted RBP9.42□□□□□ -0.9
SMAD3-215ENST00000560424 SRCP12931 536 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 ADRB3P13945 408 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 ETV5P41161 510 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 HADHBP55084 474 aaKnown RBP9.42□□□□□ -0.9
SMAD3-215ENST00000560424 CENPCQ03188 943 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 MAP9Q49MG5 647 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 CCDC122Q5T0U0 273 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 CXorf57Q6NSI4 855 aaKnown RBP9.42□□□□□ -0.9
SMAD3-215ENST00000560424 TRIM72Q6ZMU5 477 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 KIAA1328Q86T90 577 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 NOP9Q86U38 636 aaKnown RBP9.42□□□□□ -0.9
SMAD3-215ENST00000560424 HEATR4Q86WZ0 1026 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 GKN2Q86XP6 184 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 TEX19Q8NA77 164 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 OR2A12Q8NGT7 310 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 KIF18AQ8NI77 898 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 PCDH19Q8TAB3 1148 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 SLC39A13Q96H72 371 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 LENG8Q96PV6 779 aaPredicted RBP9.42□□□□□ -0.9
SMAD3-215ENST00000560424 HAPLN3Q96S86 360 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 FEM1AQ9BSK4 669 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 C1QTNF7Q9BXJ2 289 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 LACRTQ9GZZ8 138 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 ST7Q9NRC1 585 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMAD3-215ENST00000560424 RABGEF1Q9UJ41 708 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 NAALADL1Q9UQQ1 740 aa9.42□□□□□ -0.9
SMAD3-215ENST00000560424 SCN8AQ9UQD0 1980 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 SYNJ2BP-COX16A0A087WUM0 186 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 A1L4Q6 167 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 ANKRD62A6NC57 917 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 RCCD1A6NED2 376 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 IGLON5A6NGN9 336 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 KCNU1A8MYU2 1149 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.41□□□□□ -0.9
SMAD3-215ENST00000560424 O00370 1275 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 CAPN5O15484 640 aaPredicted RBP9.41□□□□□ -0.9
SMAD3-215ENST00000560424 LEFTY1O75610 366 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 H2AFZP0C0S5 128 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 TMEM253P0C7T8 217 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 SLC2A3P11169 496 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 CHRNB2P17787 502 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 TNFAIP3P21580 790 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 RRM1P23921 792 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 ITGB7P26010 798 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 CD97P48960 835 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 DNA2P51530 1060 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 MLLT10P55197 1068 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 PFN3P60673 137 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 YPEL5P62699 121 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 FMO1Q01740 532 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 TUBB2AQ13885 445 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 ARHGEF7Q14155 803 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 TCEA2Q15560 299 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 PMF1Q6P1K2 205 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 LVRNQ6Q4G3 990 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 LCLAT1Q6UWP7 414 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 H2AFVQ71UI9 128 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 SLC47A2Q86VL8 602 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 TRIM58Q8NG06 486 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 NKD1Q969G9 470 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 KIAA1143Q96AT1 154 aaPredicted RBP9.41□□□□□ -0.9
SMAD3-215ENST00000560424 ABHD17AQ96GS6 310 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 HSFY1Q96LI6 401 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 TUBB2BQ9BVA1 445 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 B3GNT4Q9C0J1 378 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 FAM204AQ9H8W3 233 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 LZTFL1Q9NQ48 299 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 COX16Q9P0S2 106 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 HS3ST2Q9Y278 367 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 FADS3Q9Y5Q0 445 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 RNF215Q9Y6U7 377 aa9.41□□□□□ -0.9
SMAD3-215ENST00000560424 CACNA1DQ01668 2161 aa9.4□□□□□ -0.9
SMAD3-215ENST00000560424 PRR19A6NJB7 356 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms