RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 KCTD6Q8NC69 237 aa20.81■□□□□ 0.92
PSEN1-225ENST00000560005 OR13H1Q8NG92 308 aa20.81■□□□□ 0.92
PSEN1-225ENST00000560005 IFI44Q8TCB0 444 aa20.81■□□□□ 0.92
PSEN1-225ENST00000560005 NT5C3BQ969T7 300 aa20.81■□□□□ 0.92
PSEN1-225ENST00000560005 CFAP57Q96MR6 1250 aa20.81■□□□□ 0.92
PSEN1-225ENST00000560005 OSBPL8Q9BZF1 889 aa20.81■□□□□ 0.92
PSEN1-225ENST00000560005 TRIM4Q9C037 500 aa20.81■□□□□ 0.92
PSEN1-225ENST00000560005 PREBQ9HCU5 417 aa20.81■□□□□ 0.92
PSEN1-225ENST00000560005 ARGLU1Q9NWB6 273 aaPredicted RBP20.81■□□□□ 0.92
PSEN1-225ENST00000560005 PPM1HQ9ULR3 514 aa20.81■□□□□ 0.92
PSEN1-225ENST00000560005 A0A1W2PQU0 124 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 C1QTNF3-AMACRE9PGA6 284 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 NEBLO76041 1014 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 TACR2P21452 398 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 CHRNA3P32297 505 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 GJC1P36383 396 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 DUSP3P51452 185 aaPredicted RBP20.8■□□□□ 0.92
PSEN1-225ENST00000560005 SKOR1P84550 965 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 SULT2A1Q06520 285 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 NNTQ13423 1086 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 SLC12A1Q13621 1099 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 ACCSLQ4AC99 568 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 TRNP1Q6NT89 227 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 CCDC81Q6ZN84 652 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 TAC4Q86UU9 113 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 CIR1Q86X95 450 aaPredicted RBP20.8■□□□□ 0.92
PSEN1-225ENST00000560005 ARFGAP1Q8N6T3 406 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 NOA1Q8NC60 698 aaKnown RBP20.8■□□□□ 0.92
PSEN1-225ENST00000560005 PGAP3Q96FM1 320 aaPredicted RBP20.8■□□□□ 0.92
PSEN1-225ENST00000560005 ATXN7L3BQ96GX2 97 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 SLC46A1Q96NT5 459 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 NPY6RQ99463 290 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 ZWILCHQ9H900 591 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 EVA1BQ9NVM1 165 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 NAALADL1Q9UQQ1 740 aa20.8■□□□□ 0.92
PSEN1-225ENST00000560005 LRRD1A4D1F6 860 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 ZNF487B1APH4 448 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 K7ESM1 405 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 LZTS3O60299 673 aaPredicted RBP20.79■□□□□ 0.92
PSEN1-225ENST00000560005 APOEP02649 317 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 TGM2P21980 687 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 KDELR1P24390 212 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 SULT1E1P49888 294 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 NFATC3Q12968 1075 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 CDO1Q16878 200 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 C15orf59Q2T9L4 293 aaPredicted RBP20.79■□□□□ 0.92
PSEN1-225ENST00000560005 ZNF542PQ5EBM4 170 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 ERMARDQ5T6L9 678 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 SCYL2Q6P3W7 929 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 SPOCD1Q6ZMY3 1216 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 SLC22A18ASQ8N1D0 253 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 TTC13Q8NBP0 860 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 CCDC97Q96F63 343 aaPredicted RBP20.79■□□□□ 0.92
PSEN1-225ENST00000560005 AP1M1Q9BXS5 423 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 FRMD8P1Q9BZ68 369 aaPredicted RBP20.79■□□□□ 0.92
PSEN1-225ENST00000560005 USP29Q9HBJ7 922 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 SMARCAL1Q9NZC9 954 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.79■□□□□ 0.92
PSEN1-225ENST00000560005 PCSK1NQ9UHG2 260 aa20.79■□□□□ 0.92
PSEN1-225ENST00000560005 V9GYY5 206 aaPredicted RBP20.79■□□□□ 0.92
PSEN1-225ENST00000560005 NEMP2A6NFY4 417 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 SCAMP1O15126 338 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 PHF2O75151 1096 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 RARAP10276 462 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 AKT2P31751 481 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 CLDN2P57739 230 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 DHX34Q14147 1143 aaKnown RBP20.78■□□□□ 0.92
PSEN1-225ENST00000560005 CYP1B1Q16678 543 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 ZC3H12AQ5D1E8 599 aaKnown RBP20.78■□□□□ 0.92
PSEN1-225ENST00000560005 PIP5KL1Q5T9C9 394 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 Q6ZVU0 165 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 RNF25Q96BH1 459 aaPredicted RBP20.78■□□□□ 0.92
PSEN1-225ENST00000560005 PRR11Q96HE9 360 aaPredicted RBP20.78■□□□□ 0.92
PSEN1-225ENST00000560005 KRT12Q99456 494 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 DUSP23Q9BVJ7 150 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 MAK16Q9BXY0 300 aaKnown RBP20.78■□□□□ 0.92
PSEN1-225ENST00000560005 FAM117AQ9C073 453 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 DNAJC28Q9NX36 388 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 IL17BQ9UHF5 180 aa20.78■□□□□ 0.92
PSEN1-225ENST00000560005 HEMK1Q9Y5R4 338 aaPredicted RBP20.78■□□□□ 0.92
PSEN1-225ENST00000560005 COL27A1Q8IZC6 1860 aaPredicted RBP20.77■□□□□ 0.92
PSEN1-225ENST00000560005 PMS2P1A4D2B8 440 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 F5H5T6 163 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 MCF2LO15068 1137 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 BNIP3LO60238 219 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 RHOXF2BP0C7M4 288 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 HNRNPA2B1P22626 353 aaKnown RBP20.77■□□□□ 0.92
PSEN1-225ENST00000560005 IL1R2P27930 398 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 FNTAP49354 379 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 ZNF135P52742 658 aaPredicted RBP20.77■□□□□ 0.92
PSEN1-225ENST00000560005 PLK1P53350 603 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 HDAC4P56524 1084 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 DEUP1Q05D60 604 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 SRSF1Q07955 248 aaKnown RBP eCLIP20.77■□□□□ 0.92
PSEN1-225ENST00000560005 TFDP2Q14188 446 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 DLG2Q15700 870 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 CDKN3Q16667 212 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 ZNF284Q2VY69 593 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 ARL13BQ3SXY8 428 aa20.77■□□□□ 0.92
PSEN1-225ENST00000560005 WDR93Q6P2C0 686 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms