RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 XPAP23025 273 aaPredicted RBP17.86■□□□□ 0.45
HDDC3-205ENST00000559898 SCNN1BP51168 640 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 ADKP55263 362 aaKnown RBP17.86■□□□□ 0.45
HDDC3-205ENST00000559898 MAXP61244 160 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 IHHQ14623 411 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 INPP5AQ14642 412 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 PRRT3Q5FWE3 981 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 PERM1Q5SV97 790 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 SFTPA2Q8IWL1 248 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 FAM174AQ8TBP5 190 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 IFI44Q8TCB0 444 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 SYN2Q92777 582 aaPredicted RBP17.86■□□□□ 0.45
HDDC3-205ENST00000559898 ECHDC3Q96DC8 303 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 TRIM11Q96F44 468 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 MRPL47Q9HD33 250 aaKnown RBP17.86■□□□□ 0.45
HDDC3-205ENST00000559898 APOBEC3BQ9UH17 382 aaKnown RBP17.86■□□□□ 0.45
HDDC3-205ENST00000559898 ATP8A1Q9Y2Q0 1164 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 PCDHGC4Q9Y5F7 938 aa17.86■□□□□ 0.45
HDDC3-205ENST00000559898 PMS2P1A4D2B8 440 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 EIF3CLB5ME19 914 aaKnown RBP17.85■□□□□ 0.45
HDDC3-205ENST00000559898 H3BRJ5 948 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 LOC400499M0QZD8 3231 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 MAFKO60675 156 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 TSHRP16473 764 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 TGM2P21980 687 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 ITPKBP27987 946 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 HNF1BP35680 557 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 GJC1P36383 396 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 CSNK1DP48730 415 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 THOP1P52888 689 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 TAS2R40P59535 323 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 ILKQ13418 452 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 LBRQ14739 615 aaKnown RBP17.85■□□□□ 0.45
HDDC3-205ENST00000559898 LRRC14Q15048 493 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 KIF26BQ2KJY2 2108 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 ALG11Q2TAA5 492 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 CCDC122Q5T0U0 273 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 CDCP2Q5VXM1 449 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 PSTKQ8IV42 348 aaKnown RBP17.85■□□□□ 0.45
HDDC3-205ENST00000559898 DCBLD1Q8N8Z6 715 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 FAM181AQ8N9Y4 354 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 ZNF641Q96N77 438 aaPredicted RBP17.85■□□□□ 0.45
HDDC3-205ENST00000559898 DCBLD2Q96PD2 775 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 EIF3CQ99613 913 aaKnown RBP17.85■□□□□ 0.45
HDDC3-205ENST00000559898 CLCA2Q9UQC9 943 aa17.85■□□□□ 0.45
HDDC3-205ENST00000559898 A0A1W2PNU3 283 aaPredicted RBP17.84■□□□□ 0.45
HDDC3-205ENST00000559898 CPED1A4D0V7 1026 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 CR2P20023 1033 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 ARSEP51690 589 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 ELP6Q0PNE2 266 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 TRAF2Q12933 501 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 FAXCQ5TGI0 409 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 ALKBH5Q6P6C2 394 aaKnown RBP17.84■□□□□ 0.45
HDDC3-205ENST00000559898 LIPIQ6XZB0 460 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 MACC1Q6ZN28 852 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 EFL1Q7Z2Z2 1120 aaKnown RBP17.84■□□□□ 0.45
HDDC3-205ENST00000559898 SLC35F3Q8IY50 421 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 NIPA2Q8N8Q9 360 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 HCAR2Q8TDS4 363 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 TUBGCP5Q96RT8 1024 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 APOOQ9BUR5 198 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 ATP13A3Q9H7F0 1226 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 NOD2Q9HC29 1040 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 LUC7L2Q9Y383 392 aaKnown RBP17.84■□□□□ 0.45
HDDC3-205ENST00000559898 AK5Q9Y6K8 562 aa17.84■□□□□ 0.45
HDDC3-205ENST00000559898 GOLGA6L19H0YKK7 550 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 H3BM21 787 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 YY2O15391 372 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 MFSD11O43934 449 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 LZTS3O60299 673 aaPredicted RBP17.83■□□□□ 0.44
HDDC3-205ENST00000559898 BRINP1O60477 761 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 RECQL5O94762 991 aaPredicted RBP17.83■□□□□ 0.44
HDDC3-205ENST00000559898 ALPPL2P10696 532 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 SERPINA4P29622 427 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 CDH6P55285 790 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 BCL2L1Q07817 233 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 PIGHQ14442 188 aaPredicted RBP17.83■□□□□ 0.44
HDDC3-205ENST00000559898 BOLA3Q53S33 107 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 BRAT1Q6PJG6 821 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 TMCO3Q6UWJ1 677 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 RD3Q7Z3Z2 195 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 ZSCAN30Q86W11 494 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 HID1Q8IV36 788 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 PSKH2Q96QS6 385 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 BOCQ9BWV1 1114 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 LGR4Q9BXB1 951 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 MRPL40Q9NQ50 206 aaKnown RBP17.83■□□□□ 0.44
HDDC3-205ENST00000559898 B4GALT6Q9UBX8 382 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 CSNK1G3Q9Y6M4 447 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 FAM208BQ5VWN6 2430 aa17.83■□□□□ 0.44
HDDC3-205ENST00000559898 BPTFQ12830 3046 aa17.82■□□□□ 0.44
HDDC3-205ENST00000559898 NEMP2A6NFY4 417 aa17.82■□□□□ 0.44
HDDC3-205ENST00000559898 TMEM202A6NGA9 273 aa17.82■□□□□ 0.44
HDDC3-205ENST00000559898 ARL4AP40617 200 aa17.82■□□□□ 0.44
HDDC3-205ENST00000559898 SSR1P43307 286 aaKnown RBP17.82■□□□□ 0.44
HDDC3-205ENST00000559898 YPEL5P62699 121 aa17.82■□□□□ 0.44
HDDC3-205ENST00000559898 TPM4P67936 248 aa17.82■□□□□ 0.44
HDDC3-205ENST00000559898 NSUN2Q08J23 767 aaKnown RBP eCLIP17.82■□□□□ 0.44
HDDC3-205ENST00000559898 RTP5Q14D33 572 aa17.82■□□□□ 0.44
HDDC3-205ENST00000559898 ACAP1Q15027 740 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms