RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 TCEA3O75764 348 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 COL9A1P20849 921 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 CCNHP51946 323 aaPredicted RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 ITGA8P53708 1063 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 SEMG2Q02383 582 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 GRSF1Q12849 480 aaKnown RBP eCLIP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 GAS6Q14393 721 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 LONRF1Q17RB8 773 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 PARP6Q2NL67 630 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 RNASEH2BQ5TBB1 312 aaKnown RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 CCDC25Q86WR0 208 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 ZSWIM9Q86XI8 627 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 STK40Q8N2I9 435 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 GBP7Q8N8V2 638 aaPredicted RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 TXNDC5Q8NBS9 432 aaKnown RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 IPMKQ8NFU5 416 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 OR2AP1Q8NGE2 309 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 VAT1Q99536 393 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 POLR1EQ9GZS1 481 aaKnown RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 HECAQ9UBI9 543 aaPredicted RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 TRHDEQ9UKU6 1024 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 SARDHQ9UL12 918 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 STARD13Q9Y3M8 1113 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 STON1Q9Y6Q2 735 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 BPTFQ12830 3046 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 TMEM120BA0PK00 339 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 PLK4O00444 970 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 DNALI1O14645 258 aaPredicted RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 STK10O94804 968 aaKnown RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 PRKCGP05129 697 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 EPHX1P07099 455 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 CHRNB1P11230 501 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 CAV1Q03135 178 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 TRAF2Q12933 501 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 KCNJ11Q14654 390 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 RFTN1Q14699 578 aaPredicted RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 UBXN2BQ14CS0 331 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 EIF4HQ15056 248 aaKnown RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 CCDC38Q502W7 563 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 LRRC73Q5JTD7 316 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 HP1BP3Q5SSJ5 553 aaPredicted RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 C9orf64Q5T6V5 341 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 KCTD11Q693B1 232 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 NCEH1Q6PIU2 408 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 ZNF534Q76KX8 674 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 AGGF1Q8N302 714 aaeCLIP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 NAT8LQ8N9F0 302 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 RPLP0P6Q8NHW5 317 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 CCHCR1Q8TD31 782 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 DYDC1Q8WWB3 177 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 SNF8Q96H20 258 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 MRGPRX2Q96LB1 330 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 FCRL5Q96RD9 977 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 PLCD4Q9BRC7 762 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 SLC25A51Q9H1U9 297 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 ZDHHC6Q9H6R6 413 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 WNT16Q9UBV4 365 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 FARP1Q9Y4F1 1045 aaPredicted RBP11.69□□□□□ -0.54
TM2D3-208ENST00000559891 TECTAO75443 2155 aa11.69□□□□□ -0.54
TM2D3-208ENST00000559891 SUN1O94901 812 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 KLF8O95600 359 aaPredicted RBP11.68□□□□□ -0.54
TM2D3-208ENST00000559891 TTC4O95801 387 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 PRLP01236 227 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 ASLP04424 464 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 SRPRAP08240 638 aaKnown RBP11.68□□□□□ -0.54
TM2D3-208ENST00000559891 TNFRSF4P43489 277 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 NCALDP61601 193 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 ST8SIA6P61647 398 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 SEMA5AQ13591 1074 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 HNRNPA1L2Q32P51 320 aaKnown RBP11.68□□□□□ -0.54
TM2D3-208ENST00000559891 CARD16Q5EG05 197 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 ALG1LQ6GMV1 187 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 TLDC1Q6P9B6 456 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 KDELC1Q6UW63 502 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 FLCNQ8NFG4 579 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 PDCD6IPQ8WUM4 868 aaKnown RBP11.68□□□□□ -0.54
TM2D3-208ENST00000559891 CKAP2Q8WWK9 683 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 TADA1Q96BN2 335 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 NUDCD1Q96RS6 583 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 FAM129BQ96TA1 746 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 TRIM56Q9BRZ2 755 aaKnown RBP11.68□□□□□ -0.54
TM2D3-208ENST00000559891 SCUBE2Q9NQ36 999 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 PRSS16Q9NQE7 514 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 CHKBQ9Y259 395 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.68□□□□□ -0.54
TM2D3-208ENST00000559891 WASF2Q9Y6W5 498 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 TCP11X1B4DZS4 312 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 TIMM44O43615 452 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 UBOX5O94941 541 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 ACSL3O95573 720 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 PIRTP0C851 137 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 ALADP13716 330 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 GLULP15104 373 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 NQO1P15559 274 aaKnown RBP11.68□□□□□ -0.54
TM2D3-208ENST00000559891 TPH1P17752 444 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 DRD1P21728 446 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 WNT3AP56704 352 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 GALNT3Q14435 633 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 E2F5Q15329 346 aa11.68□□□□□ -0.54
TM2D3-208ENST00000559891 MYLK3Q32MK0 819 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms