RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 LRRC73Q5JTD7 316 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 KIAA1211LQ6NV74 962 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 PKN3Q6P5Z2 889 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 EMBQ6PCB8 327 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 CAPN12Q6ZSI9 719 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 ZSWIM9Q86XI8 627 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.5□□□□□ -0.73
TPM1-221ENST00000559831 MPP5Q8N3R9 675 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 TMIEQ8NEW7 156 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 PPHLN1Q8NEY8 458 aaKnown RBP10.5□□□□□ -0.73
TPM1-221ENST00000559831 FLCNQ8NFG4 579 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 BLOC1S5Q8TDH9 187 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 PIH1D2Q8WWB5 315 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.5□□□□□ -0.73
TPM1-221ENST00000559831 VOPP1Q96AW1 172 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 LRIG1Q96JA1 1093 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 C9orf72Q96LT7 481 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 SMIM14Q96QK8 99 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 TSPYL1Q9H0U9 437 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 DYRK4Q9NR20 520 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 POLR3BQ9NW08 1133 aaPredicted RBP10.5□□□□□ -0.73
TPM1-221ENST00000559831 SAMD15Q9P1V8 674 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 SARDHQ9UL12 918 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 MMP17Q9ULZ9 603 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 PHTF1Q9UMS5 762 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 SCN8AQ9UQD0 1980 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 LRRK1Q38SD2 2015 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 CCDC78A2IDD5 438 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 CCDC151A5D8V7 595 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 C16orf96A6NNT2 1141 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 ANKRD66B4E2M5 251 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 E7ESA3 106 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 PLK4O00444 970 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 ALPIP09923 528 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 ALADP13716 330 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 ABL2P42684 1182 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 MAGEA3P43357 314 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 GRIA4P48058 902 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 METAP1P53582 386 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 PMS2P54278 862 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 RPL26P61254 145 aaKnown RBP10.49□□□□□ -0.73
TPM1-221ENST00000559831 SEMG2Q02383 582 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 PTPRRQ15256 657 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 HSF5Q4G112 596 aaPredicted RBP10.49□□□□□ -0.73
TPM1-221ENST00000559831 FAM46CQ5VWP2 391 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 ZNF776Q68DI1 518 aaPredicted RBP10.49□□□□□ -0.73
TPM1-221ENST00000559831 FBXO38Q6PIJ6 1188 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 PARS2Q7L3T8 475 aaKnown RBP10.49□□□□□ -0.73
TPM1-221ENST00000559831 TMC3Q7Z5M5 1100 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 IGDCC3Q8IVU1 814 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 NDUFAF2Q8N183 169 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 ZNF687Q8N1G0 1237 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 AGGF1Q8N302 714 aaeCLIP10.49□□□□□ -0.73
TPM1-221ENST00000559831 SYNPOQ8N3V7 929 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 FBXO36Q8NEA4 188 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 OR2T3Q8NH03 318 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 PYROXD1Q8WU10 500 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 UBLCP1Q8WVY7 318 aaPredicted RBP10.49□□□□□ -0.73
TPM1-221ENST00000559831 ARRDC3Q96B67 414 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 ECHDC3Q96DC8 303 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 STAMBPL1Q96FJ0 436 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 PPP1R16AQ96I34 528 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 SIGLEC10Q96LC7 697 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 UHRF1Q96T88 793 aaPredicted RBP10.49□□□□□ -0.73
TPM1-221ENST00000559831 NELL2Q99435 816 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 IL22Q9GZX6 179 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 SLC6A17Q9H1V8 727 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 RSPH9Q9H1X1 276 aaPredicted RBP10.49□□□□□ -0.73
TPM1-221ENST00000559831 CDC42EP4Q9H3Q1 356 aaKnown RBP10.49□□□□□ -0.73
TPM1-221ENST00000559831 MFSD1Q9H3U5 465 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 ARNT2Q9HBZ2 717 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 PPM1HQ9ULR3 514 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 RPL26L1Q9UNX3 145 aaKnown RBP10.49□□□□□ -0.73
TPM1-221ENST00000559831 SPO11Q9Y5K1 396 aa10.49□□□□□ -0.73
TPM1-221ENST00000559831 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.49□□□□□ -0.73
TPM1-221ENST00000559831 A0A0J9YYE9 177 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 A0A1W2PQ67 120 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 A0A1W2PQF6 199 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 TCRBV21S2A2A0A5A6 115 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 TSPAN11A1L157 253 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 A8MX80 341 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 UPK3BL1B0FP48 263 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 UPK3BL2E5RIL1 263 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 MID1O15344 667 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 ADH1BP00325 375 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 TRBC1P01850 177 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 TIMP2P16035 220 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 H2AFXP16104 143 aaPredicted RBP10.48□□□□□ -0.73
TPM1-221ENST00000559831 ITGB7P26010 798 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 COPAP53621 1224 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 RPS14P62263 151 aaKnown RBP10.48□□□□□ -0.73
TPM1-221ENST00000559831 POLR2LP62875 67 aaKnown RBP10.48□□□□□ -0.73
TPM1-221ENST00000559831 FAM193AP78312 1265 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 SATB1Q01826 763 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 CST6Q15828 149 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 PCID2Q5JVF3 399 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 FBXL19Q6PCT2 694 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 BRAT1Q6PJG6 821 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 CES3Q6UWW8 571 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 TMEM92Q6UXU6 159 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms