RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 TSPAN11A1L157 253 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CCDC66A2RUB6 948 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CFAP69A5D8W1 941 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 BTNL10A8MVZ5 291 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 C10orf142B7Z368 130 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 RNF103O00237 685 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 PDE2AO00408 941 aaPredicted RBP4.4□□□□□ -1.71
SNX1-205ENST00000559339 TRAFD1O14545 582 aaPredicted RBP4.4□□□□□ -1.71
SNX1-205ENST00000559339 WNT9AO14904 365 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 GIPC1O14908 333 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 MTSS1O43312 755 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 MFSD11O43934 449 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 BUB1BO60566 1050 aaPredicted RBP4.4□□□□□ -1.71
SNX1-205ENST00000559339 MMP20O60882 483 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CBFA2T3O75081 653 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 LDOC1O95751 146 aaPredicted RBP4.4□□□□□ -1.71
SNX1-205ENST00000559339 CSF2P04141 144 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 WNT1P04628 370 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CYP2A6P11509 494 aaPredicted RBP4.4□□□□□ -1.71
SNX1-205ENST00000559339 C6P13671 934 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 TIMP2P16035 220 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 TGM2P21980 687 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 KELP23276 732 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CTNNA2P26232 953 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 EPHA8P29322 1005 aaPredicted RBP4.4□□□□□ -1.71
SNX1-205ENST00000559339 CDC25BP30305 580 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 MMP12P39900 470 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 ABL2P42684 1182 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 RGRP47804 291 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 LIG3P49916 1009 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 PEX5P50542 639 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 ARSEP51690 589 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 VAV2P52735 878 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CLDN2P57739 230 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 TAS2R40P59535 323 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 COPS2P61201 443 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 MAXP61244 160 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 YPEL5P62699 121 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 DYNLT1P63172 113 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 IL9RQ01113 521 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 BNC1Q01954 994 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 GBE1Q04446 702 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 PPIDQ08752 370 aaKnown RBP4.4□□□□□ -1.71
SNX1-205ENST00000559339 AP1B1Q10567 949 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 FOXC1Q12948 553 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 ARHGEF7Q14155 803 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 TMEM52BQ4KMG9 183 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 LRRC73Q5JTD7 316 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 PRAMEF14Q5SWL7 426 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 KAZNQ674X7 775 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 SLC9A4Q6AI14 798 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CCDC70Q6NSX1 233 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 C11orf63Q6NUN7 778 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 KYAT3Q6YP21 454 aaKnown RBP4.4□□□□□ -1.71
SNX1-205ENST00000559339 ABI3BPQ7Z7G0 1075 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 GLRX5Q86SX6 157 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 TP53INP2Q8IXH6 220 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CCDC13Q8IYE1 715 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 SYCE1Q8N0S2 351 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 GALNT15Q8N3T1 639 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.4□□□□□ -1.71
SNX1-205ENST00000559339 TEX26Q8N6G2 289 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 UBL4BQ8N7F7 174 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 PLD5Q8N7P1 536 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 SPC24Q8NBT2 197 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CCDC112Q8NEF3 446 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 OR13H1Q8NG92 308 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 KIAA1524Q8TCG1 905 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 SAP25Q8TEE9 199 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 TFB1MQ8WVM0 346 aaKnown RBP4.4□□□□□ -1.71
SNX1-205ENST00000559339 UBE2Q2Q8WVN8 375 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 BTN2A2Q8WVV5 523 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 SCG3Q8WXD2 468 aaKnown RBP4.4□□□□□ -1.71
SNX1-205ENST00000559339 ANP32BQ92688 251 aaKnown RBP4.4□□□□□ -1.71
SNX1-205ENST00000559339 GLMNQ92990 594 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 FATE1Q969F0 183 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CENPTQ96BT3 561 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 HAUS1Q96CS2 278 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 FAF2Q96CS3 445 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 HDAC11Q96DB2 347 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 ECHDC3Q96DC8 303 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CAMK1GQ96NX5 476 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 TSGA13Q96PP4 275 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 LGMNQ99538 433 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 SEMA3CQ99985 751 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 ADGRE3Q9BY15 652 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 SLC13A1Q9BZW2 595 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 TSGA10Q9BZW7 698 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 NOD2Q9HC29 1040 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 NT5MQ9NPB1 228 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 FZD3Q9NPG1 666 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 DNAJC28Q9NX36 388 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 DTLQ9NZJ0 730 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 NCKIPSDQ9NZQ3 722 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 GGT7Q9UJ14 662 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 PHTF1Q9UMS5 762 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 ITM2BQ9Y287 266 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 HYOU1Q9Y4L1 999 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 PCDHGC4Q9Y5F7 938 aa4.4□□□□□ -1.71
SNX1-205ENST00000559339 CACNA1AO00555 2505 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms