RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 GJC3Q8NFK1 279 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 GOT1L1Q8NHS2 421 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 CAGE1Q8TC20 777 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 NEU4Q8WWR8 484 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SLC9A6Q92581 669 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SGCDQ92629 289 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 KAT2AQ92830 837 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 OTULINQ96BN8 352 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 PTERQ96BW5 349 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 RNF183Q96D59 192 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 PGAP3Q96FM1 320 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 VCPIP1Q96JH7 1222 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 COQ10AQ96MF6 247 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF570Q96NI8 536 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 FRG2BQ96QU4 278 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 GAD1Q99259 594 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 MXRA8Q9BRK3 442 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 EFHD1Q9BUP0 239 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SCNM1Q9BWG6 230 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 GLIS2Q9BZE0 524 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 LHPPQ9H008 270 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 MMRN2Q9H8L6 949 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SETD4Q9NVD3 440 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 ARGLU1Q9NWB6 273 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 ASB6Q9NWX5 421 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 GAR1Q9NY12 217 aaKnown RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SEMA5BQ9P283 1151 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 ABI3Q9P2A4 366 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 MARCH4Q9P2E8 410 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SEL1LQ9UBV2 794 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 PLEKHB1Q9UF11 243 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 UTS2RQ9UKP6 389 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 TSC22D4Q9Y3Q8 395 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 CMAHPQ9Y471 501 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 LSM4Q9Y4Z0 139 aaKnown RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 WNT6Q9Y6F9 365 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 MAU2Q9Y6X3 613 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SALL3Q9BXA9 1300 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 LOC100509620A0A075B734 347 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 C17orf102A2RUQ5 167 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 OR2A25A4D2G3 310 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 URADA6NGE7 173 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CBY3A6NI87 242 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 HSPB2A8KAH6 182 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CDRT15L2A8MXV6 281 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 KLRF2D3W0D1 207 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 EBAG9O00559 213 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 HCRTR2O43614 444 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 MITFO75030 526 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TBX10O75333 385 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TADA2AO75478 443 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 PSMD10O75832 226 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TGDSO95455 350 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 LCKP06239 509 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 ATP5BP06576 529 aaKnown RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 HOXB5P09067 269 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 QDPRP09417 244 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CCDC175P0C221 793 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CBSLP0DN79 551 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 ETFAP13804 333 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF20P17024 532 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 GJA1P17302 382 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 ANXA7P20073 488 aaKnown RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 SP100P23497 879 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 PON1P27169 355 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 ADRA1BP35368 520 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CBSP35520 551 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 RAD23AP54725 363 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 SLC12A2P55011 1212 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TMF1P82094 1093 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 MRPS5P82675 430 aaKnown RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 GAD2Q05329 585 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 SLC18A2Q05940 514 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 FOXI1Q12951 378 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 GRIK3Q13003 919 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 SNTB1Q13884 538 aaKnown RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 SCARB2Q14108 478 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 KRT33BQ14525 404 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 PCLAFQ15004 111 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TNIP1Q15025 636 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 HSPB2Q16082 182 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 C15orf59Q2T9L4 293 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CXorf66Q5JRM2 361 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 PRAMEF19Q5SWL8 479 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 VWA5B1Q5TIE3 1220 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 HECTD2Q5U5R9 776 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 PRAMEF17Q5VTA0 474 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TBC1D9BQ66K14 1250 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 NUGGCQ68CJ6 796 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 FBXO42Q6P3S6 717 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 AAGABQ6PD74 315 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 FBXO46Q6PJ61 603 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 IL27RAQ6UWB1 636 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 PET117Q6UWS5 81 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CHST3Q7LGC8 479 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 PLPPR4Q7Z2D5 763 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CCDC186Q7Z3E2 898 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 ADGRA1Q86SQ6 560 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms