RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 ZMIZ1Q9ULJ6 1067 aa17.73■□□□□ 0.43
SMAD3-210ENST00000559092 IGF2RP11717 2491 aa17.73■□□□□ 0.43
SMAD3-210ENST00000559092 COL5A1P20908 1838 aaPredicted RBP17.72■□□□□ 0.43
SMAD3-210ENST00000559092 CACNA1BQ00975 2339 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 WDFY3Q8IZQ1 3526 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 HTRA2O43464 458 aaPredicted RBP17.72■□□□□ 0.43
SMAD3-210ENST00000559092 SOCS5O75159 536 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 CD48P09326 243 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 GIMD1P0DJR0 217 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 C6P13671 934 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 IGFALSP35858 605 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 LIG3P49916 1009 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 ADKP55263 362 aaKnown RBP17.72■□□□□ 0.43
SMAD3-210ENST00000559092 E2F1Q01094 437 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 TBX2Q13207 712 aaPredicted RBP17.72■□□□□ 0.43
SMAD3-210ENST00000559092 PAFAH1B3Q15102 231 aaKnown RBP17.72■□□□□ 0.43
SMAD3-210ENST00000559092 WSCD2Q2TBF2 565 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 ANKRD20A8PQ5CZ79 823 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 ZNF542PQ5EBM4 170 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 SARM1Q6SZW1 724 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 ZSWIM9Q86XI8 627 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 RHOT2Q8IXI1 618 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 CACTIN-AS1Q8N1I8 211 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 SLC35G2Q8TBE7 412 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 ZCCHC14Q8WYQ9 949 aaKnown RBP17.72■□□□□ 0.43
SMAD3-210ENST00000559092 FATE1Q969F0 183 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 TBATAQ96M53 351 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 MGME1Q9BQP7 344 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 EVA1BQ9NVM1 165 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 NCKIPSDQ9NZQ3 722 aa17.72■□□□□ 0.43
SMAD3-210ENST00000559092 AKR1B15C9JRZ8 316 aaPredicted RBP17.71■□□□□ 0.43
SMAD3-210ENST00000559092 TPP1O14773 563 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 LZTS3O60299 673 aaPredicted RBP17.71■□□□□ 0.43
SMAD3-210ENST00000559092 MTA2O94776 668 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 CKMT1AP12532 417 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 JUNDP17535 347 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 NFKBIAP25963 317 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 GALNT2Q10471 571 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 EIF2B5Q13144 721 aaKnown RBP17.71■□□□□ 0.43
SMAD3-210ENST00000559092 MMRN1Q13201 1228 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 ATP13A4Q4VNC1 1196 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 MACC1Q6ZN28 852 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 TEX26Q8N6G2 289 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 PAF1Q8N7H5 531 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 ZNF548Q8NEK5 533 aaPredicted RBP17.71■□□□□ 0.43
SMAD3-210ENST00000559092 PCDH19Q8TAB3 1148 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 FAF2Q96CS3 445 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 NOD2Q9HC29 1040 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 SCUBE2Q9NQ36 999 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 SPASTQ9UBP0 616 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 KLF15Q9UIH9 416 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 INTUQ9ULD6 942 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 FREM2Q5SZK8 3169 aa17.71■□□□□ 0.43
SMAD3-210ENST00000559092 TMEM131Q92545 1883 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 ZNF487B1APH4 448 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 K7ESM1 405 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 FFAR2O15552 330 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 AQP9O43315 295 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 JUPP14923 745 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 MX2P20592 715 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 CES1P23141 567 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 HTR1BP28222 390 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 HNF1BP35680 557 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 GARSP41250 739 aaKnown RBP17.7■□□□□ 0.42
SMAD3-210ENST00000559092 MMP13P45452 471 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 DUSP3P51452 185 aaPredicted RBP17.7■□□□□ 0.42
SMAD3-210ENST00000559092 TAS2R40P59535 323 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 TCEAL1Q15170 157 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 IRF4Q15306 451 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 TPRG1LQ5T0D9 272 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 TIGD7Q6NT04 549 aaPredicted RBP17.7■□□□□ 0.42
SMAD3-210ENST00000559092 DPPA4Q7L190 304 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 PGBD5Q8N414 524 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 PDCD7Q8N8D1 485 aaKnown RBP17.7■□□□□ 0.42
SMAD3-210ENST00000559092 RFFLQ8WZ73 363 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 NSMCE3Q96MG7 304 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 TSGA13Q96PP4 275 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 HAUS2Q9NVX0 235 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 KCTD5Q9NXV2 234 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 DKK4Q9UBT3 224 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 AMACRQ9UHK6 382 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 PCDHGC4Q9Y5F7 938 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 TRPM6Q9BX84 2022 aa17.7■□□□□ 0.42
SMAD3-210ENST00000559092 ELFN1P0C7U0 828 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 CCNCP24863 283 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 BLKP51451 505 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 DAB2P98082 770 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 RALGDSQ12967 914 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 MTM1Q13496 603 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 CAMK2BQ13554 666 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 INPP5AQ14642 412 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 MESDQ14696 234 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 IFI16Q16666 785 aaKnown RBP17.69■□□□□ 0.42
SMAD3-210ENST00000559092 NCBP2-AS2Q69YL0 99 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 ZCCHC8Q6NZY4 707 aaKnown RBP17.69■□□□□ 0.42
SMAD3-210ENST00000559092 LIPIQ6XZB0 460 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 VSIG1Q86XK7 387 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 CPNE8Q86YQ8 564 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 ATL2Q8NHH9 583 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 MAML1Q92585 1016 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms