RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ZCCHC14Q8WYQ9 949 aaKnown RBP7.54□□□□□ -1.2
SPG11-213ENST00000558988 DNASE2BQ8WZ79 361 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 BIRC7Q96CA5 298 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 SLC39A13Q96H72 371 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 PPP1R13BQ96KQ4 1090 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 BTN2A3PQ96KV6 586 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 RPRD1AQ96P16 312 aaPredicted RBP7.54□□□□□ -1.2
SPG11-213ENST00000558988 NOX5Q96PH1 765 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 SIK2Q9H0K1 926 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 PABPC3Q9H361 631 aaKnown RBP7.54□□□□□ -1.2
SPG11-213ENST00000558988 THAP9Q9H5L6 903 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 TM9SF3Q9HD45 589 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 AASDHPPTQ9NRN7 309 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 TM7SF3Q9NS93 570 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 CHMP5Q9NZZ3 219 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 NTMQ9P121 344 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 KIAA1522Q9P206 1035 aaPredicted RBP7.54□□□□□ -1.2
SPG11-213ENST00000558988 VANGL2Q9ULK5 521 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 CNTN6Q9UQ52 1028 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.54□□□□□ -1.2
SPG11-213ENST00000558988 SNX10Q9Y5X0 201 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 PCNX2A6NKB5 2137 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 DMDP11532 3685 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 EDDM13A0A1B0GTR0 161 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 KCNU1A8MYU2 1149 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 M0QYT0 321 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 FOXN3O00409 490 aaPredicted RBP7.53□□□□□ -1.2
SPG11-213ENST00000558988 HSF2BPO75031 334 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 IGLV3-19P01714 112 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 ASLP04424 464 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 FTH1P19P0C7X4 201 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 SLC8A1P32418 973 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 NNMTP40261 264 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 SULT1E1P49888 294 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 C21orf59P57076 290 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 ECT2LQ008S8 904 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 BNC1Q01954 994 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 MVKQ03426 396 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 ICAM4Q14773 271 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 CST6Q15828 149 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 MAN2A1Q16706 1144 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 HNRNPA1L2Q32P51 320 aaKnown RBP7.53□□□□□ -1.2
SPG11-213ENST00000558988 PTPN20Q4JDL3 420 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 C2CD6Q53TS8 623 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 EFHC1Q5JVL4 640 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 RABGAP1LQ5R372 815 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 KIAA0895LQ68EN5 471 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 ALG1LQ6GMV1 187 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 NCEH1Q6PIU2 408 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 FOXR2Q6PJQ5 311 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 C11orf57Q6ZUT1 292 aaPredicted RBP7.53□□□□□ -1.2
SPG11-213ENST00000558988 KIAA0907Q7Z7F0 614 aaPredicted RBP7.53□□□□□ -1.2
SPG11-213ENST00000558988 PHLDB2Q86SQ0 1253 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 TMEM110Q86TL2 294 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 FAM114A1Q8IWE2 563 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 CCAR2Q8N163 923 aaKnown RBP7.53□□□□□ -1.2
SPG11-213ENST00000558988 ZNF557Q8N988 423 aaPredicted RBP7.53□□□□□ -1.2
SPG11-213ENST00000558988 MLKLQ8NB16 471 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 OR14C36Q8NHC7 312 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 ADAMTS17Q8TE56 1095 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 SHC3Q92529 594 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 TTC17Q96AE7 1141 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 MRGPRX3Q96LB0 322 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 FAM81BQ96LP2 452 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 SLC6A18Q96N87 628 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 ZDHHC5Q9C0B5 715 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 NUP62CLQ9H1M0 184 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 RSPH9Q9H1X1 276 aaPredicted RBP7.53□□□□□ -1.2
SPG11-213ENST00000558988 NEUROG2Q9H2A3 272 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 CLSTN2Q9H4D0 955 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 SIX2Q9NPC8 291 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.53□□□□□ -1.2
SPG11-213ENST00000558988 ERVK13-1Q9NX77 482 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 TAB2Q9NYJ8 693 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 VPS28Q9UK41 221 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 BTBD3Q9Y2F9 522 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 FHOD1Q9Y613 1164 aa7.53□□□□□ -1.2
SPG11-213ENST00000558988 TMEM131Q92545 1883 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 TBC1D3DA0A087WVF3 549 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 TBC1D3IA0A087WXS9 549 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 TBC1D3EA0A087X179 549 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 TBC1D3KA0A087X1G2 549 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 TBC1D3FA6NER0 549 aaPredicted RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 LRRC72A6NJI9 287 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 TBC1D3LB9A6J9 549 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 H0Y8X5 98 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 DAB1O75553 588 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 GJB3O75712 270 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 ATXN1LP0C7T5 689 aaKnown RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 TBC1D3HP0C7X1 549 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 SLC2A3P11169 496 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 ZNF18P17022 549 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 TFE3P19532 575 aaPredicted RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 CD27P26842 260 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 MAT2AP31153 395 aaKnown RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 CCR1P32246 355 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 METAP1P53582 386 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 GALCP54803 685 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 ZBTB16Q05516 673 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms