RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CNPY4Q8N129 248 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 CPXM2Q8N436 756 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 SH3RF2Q8TEC5 729 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 CCT6BQ92526 530 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 EXOC2Q96KP1 924 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 PITPNM3Q9BZ71 974 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 RHOJQ9H4E5 214 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 CAB39LQ9H9S4 337 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 TDP1Q9NUW8 608 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 TXNDC16Q9P2K2 825 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 CLEC4EQ9ULY5 219 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 RRP15Q9Y3B9 282 aaKnown RBP13.05□□□□□ -0.32
SMAD3-207ENST00000558763 SH3BP1Q9Y3L3 701 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 DENND4AQ7Z401 1863 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 NUP210Q8TEM1 1887 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-207ENST00000558763 CBX4O00257 560 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 KLF11O14901 512 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 FGF1P05230 155 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 SERPINF2P08697 491 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 HLA-DPA1P20036 260 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 BGNP21810 368 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 MTHFRP42898 656 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 SLC1A2P43004 574 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 SERPINB8P50452 374 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 ARSDP51689 593 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 ACVR1Q04771 509 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 GALNT3Q14435 633 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 GRM3Q14832 879 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 FAM78AQ5JUQ0 283 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 LINGO4Q6UY18 593 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 PLD6Q8N2A8 252 aaKnown RBP13.04□□□□□ -0.32
SMAD3-207ENST00000558763 CARNMT1Q8N4J0 409 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 C2CD4AQ8NCU7 369 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-207ENST00000558763 TMA16Q96EY4 203 aaKnown RBP13.04□□□□□ -0.32
SMAD3-207ENST00000558763 CINPQ9BW66 212 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-207ENST00000558763 MUC3BQ9H195 1237 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 MANSC1Q9H8J5 431 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 LHX3Q9UBR4 397 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 VPS51Q9UID3 782 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 ZMYM5Q9UJ78 669 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 KCTD3Q9Y597 815 aa13.04□□□□□ -0.32
SMAD3-207ENST00000558763 AURKAO14965 403 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 INSIG1O15503 277 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 TIMM44O43615 452 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 PLIN3O60664 434 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 GLRA3O75311 464 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 TMCC1O94876 653 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 IL1BP01584 269 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 CSKP41240 450 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 PGGT1BP53609 377 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 PDE1BQ01064 536 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 CTBP1Q13363 440 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 SEPT7Q16181 437 aaKnown RBP13.03□□□□□ -0.32
SMAD3-207ENST00000558763 N4BP2L1Q5TBK1 243 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-207ENST00000558763 C16orf46Q6P387 395 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 KYAT3Q6YP21 454 aaKnown RBP13.03□□□□□ -0.32
SMAD3-207ENST00000558763 GRAMD1AQ96CP6 724 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 LMLNQ96KR4 655 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 RMDN2Q96LZ7 410 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 MYADMQ96S97 322 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 TDRD1Q9BXT4 1180 aaKnown RBP13.03□□□□□ -0.32
SMAD3-207ENST00000558763 IQCGQ9H095 443 aaKnown RBP13.03□□□□□ -0.32
SMAD3-207ENST00000558763 ABCF3Q9NUQ8 709 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 ZNF358Q9NW07 568 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 NSMCE4AQ9NXX6 385 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 LSM7Q9UK45 103 aaKnown RBP13.03□□□□□ -0.32
SMAD3-207ENST00000558763 CDH7Q9ULB5 785 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 GRXCR2A6NFK2 248 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 SOBPA7XYQ1 873 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 H0Y626 953 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 NDST3O95803 873 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 PROCP04070 461 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 BPGMP07738 259 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 TYK2P29597 1187 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 VIPR2P41587 438 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 IRF9Q00978 393 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 INSCQ1MX18 579 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 ZNF470Q6ECI4 717 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 RNF135Q8IUD6 432 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 ANKS4BQ8N8V4 417 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 CCDC63Q8NA47 563 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 DCAF4L2Q8NA75 395 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 TDRD5Q8NAT2 981 aaKnown RBP13.03□□□□□ -0.32
SMAD3-207ENST00000558763 BHMTQ93088 406 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 HLA-CQ95604 372 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 ASB16Q96NS5 453 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 NUDCD1Q96RS6 583 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 GDE1Q9NZC3 331 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 TMEM216Q9P0N5 145 aa13.03□□□□□ -0.32
SMAD3-207ENST00000558763 DOCK8Q8NF50 2099 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 E2F8A0AVK6 867 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 CCL22O00626 93 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 MT-CO1P00395 513 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 SCNN1BP51168 640 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 CORO7P57737 925 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 PCLAFQ15004 111 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 INO80DQ53TQ3 878 aaPredicted RBP13.02□□□□□ -0.32
SMAD3-207ENST00000558763 ZNF789Q5FWF6 425 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 MPP7Q5T2T1 576 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 FYB2Q5VWT5 728 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms