RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 FAM182AQ5T1J6 154 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 SEL1L2Q5TEA6 688 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 MEI1Q5TIA1 1274 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 ALG1LQ6GMV1 187 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 LAYNQ6UX15 382 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 ZSCAN30Q86W11 494 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 CNTD1Q8N815 330 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 TRIM58Q8NG06 486 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 UBE2Q2Q8WVN8 375 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 AGAP3Q96P47 875 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 QKIQ96PU8 341 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMAD3-205ENST00000558428 MYOCQ99972 504 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 WRAP53Q9BUR4 548 aaKnown RBP12.45□□□□□ -0.42
SMAD3-205ENST00000558428 FZD3Q9NPG1 666 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 PCDHB9Q9Y5E1 797 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 RAI2Q9Y5P3 530 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 GOLGA6L9A6NEM1 432 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 RIOK3O14730 519 aaKnown RBP12.44□□□□□ -0.42
SMAD3-205ENST00000558428 WNT9AO14904 365 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 ZSCAN12O43309 604 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 MTSS1O43312 755 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 MMP20O60882 483 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 PAK4O96013 591 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-205ENST00000558428 HNRNPA2B1P22626 353 aaKnown RBP12.44□□□□□ -0.42
SMAD3-205ENST00000558428 PTPN3P26045 913 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 CD38P28907 300 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 AKT2P31751 481 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 CD86P42081 329 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 C21orf59P57076 290 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 FAM193AP78312 1265 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 OTUD4Q01804 1114 aaKnown RBP12.44□□□□□ -0.42
SMAD3-205ENST00000558428 SEMG2Q02383 582 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 NIPAL4Q0D2K0 466 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 SGCGQ13326 291 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 XRCC4Q13426 336 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 FGL2Q14314 439 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 STAT4Q14765 748 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 RPS6KA1Q15418 735 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 TMEM52BQ4KMG9 183 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 TEX44Q53QW1 395 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 SLC45A4Q5BKX6 768 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 ARMC12Q5T9G4 340 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 STPG1Q5TH74 334 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 ARRDC2Q8TBH0 407 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 ACTL9Q8TC94 416 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 NETO1Q8TDF5 533 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 SKA1Q96BD8 255 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 FAM118BQ9BPY3 351 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 SLC17A9Q9BYT1 436 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 ZDHHC5Q9C0B5 715 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 TMEM9BQ9NQ34 198 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 CDV3Q9UKY7 258 aaKnown RBP12.44□□□□□ -0.42
SMAD3-205ENST00000558428 CA5BQ9Y2D0 317 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 ANKRD6Q9Y2G4 727 aa12.44□□□□□ -0.42
SMAD3-205ENST00000558428 CNOT1A5YKK6 2376 aaKnown RBP12.43□□□□□ -0.42
SMAD3-205ENST00000558428 A0A1W2PR77 199 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 CDX4O14627 284 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-205ENST00000558428 VILLO15195 856 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 TM7SF2O76062 418 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 PGLSO95336 258 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 WNT1P04628 370 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 CA4P22748 312 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 NFKBIAP25963 317 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 MMP12P39900 470 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 LIMK1P53667 647 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 EIF3EP60228 445 aaKnown RBP12.43□□□□□ -0.42
SMAD3-205ENST00000558428 BNC1Q01954 994 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 IHHQ14623 411 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 RSPO4Q2I0M5 234 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-205ENST00000558428 CDKL3Q8IVW4 592 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-205ENST00000558428 MINDY1Q8N5J2 469 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 TMEM145Q8NBT3 493 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 OR2I1PQ8NGU4 316 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 HTR3CQ8WXA8 447 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 SPOCK2Q92563 424 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 FERMT1Q9BQL6 677 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 C1QTNF2Q9BXJ5 285 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 TDRD1Q9BXT4 1180 aaKnown RBP12.43□□□□□ -0.42
SMAD3-205ENST00000558428 C10orf88Q9H8K7 445 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 GLOD4Q9HC38 313 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 TRMT1Q9NXH9 659 aaKnown RBP12.43□□□□□ -0.42
SMAD3-205ENST00000558428 KLHL8Q9P2G9 620 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-205ENST00000558428 B4GALT6Q9UBX8 382 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 PHTF1Q9UMS5 762 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 CHKBQ9Y259 395 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 COQ6Q9Y2Z9 468 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 SNX11Q9Y5W9 270 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 DCHS1Q96JQ0 3298 aa12.43□□□□□ -0.42
SMAD3-205ENST00000558428 TDRD6O60522 2096 aaKnown RBP12.42□□□□□ -0.42
SMAD3-205ENST00000558428 C4orf47A7E2U8 309 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 A8MX80 341 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 KCNK3O14649 394 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 RAD51BO15315 384 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 FZD6O60353 706 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 CER1O95813 267 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 MMP2P08253 660 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 PDHA1P08559 390 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 ELFN1P0C7U0 828 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 RBP3P10745 1247 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 CYP2A6P11509 494 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms