RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PDCD6IPQ8WUM4 868 aaKnown RBP12.49□□□□□ -0.41
TPM1-209ENST00000558072 RSPH9Q9H1X1 276 aaPredicted RBP12.49□□□□□ -0.41
TPM1-209ENST00000558072 TBC1D17Q9HA65 648 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 PPCSQ9HAB8 311 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 SAYSD1Q9NPB0 183 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 LTB4R2Q9NPC1 389 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 PRSS16Q9NQE7 514 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 RAD18Q9NS91 495 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 C2orf42Q9NWW7 574 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 KCTD5Q9NXV2 234 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 CACNA2D2Q9NY47 1150 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.49□□□□□ -0.413e-7■■□□□ 13.4
TPM1-209ENST00000558072 PPM1HQ9ULR3 514 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 MMP17Q9ULZ9 603 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 CHKBQ9Y259 395 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 PPIL1Q9Y3C6 166 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 PCDHB9Q9Y5E1 797 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 PCDHGC4Q9Y5F7 938 aa12.49□□□□□ -0.41
TPM1-209ENST00000558072 FAM237BA0A1B0GVD1 139 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 TCRBV7S3A2A0A539 114 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 TTC24A2A3L6 582 aaPredicted RBP12.48□□□□□ -0.41
TPM1-209ENST00000558072 STK25O00506 426 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 TRAFD1O14545 582 aaPredicted RBP12.48□□□□□ -0.41
TPM1-209ENST00000558072 RNF40O75150 1001 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 LEFTY1O75610 366 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 KLF8O95600 359 aaPredicted RBP12.48□□□□□ -0.41
TPM1-209ENST00000558072 AGTP01019 485 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 UGT2B4P06133 528 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 ZNF30P17039 623 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 PGAM1P18669 254 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 C5AR1P21730 350 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 PRKCHP24723 683 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 ECHS1P30084 290 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 RPS9P46781 194 aaKnown RBP12.48□□□□□ -0.41
TPM1-209ENST00000558072 DGKEP52429 567 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 PMS2P54278 862 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 PTPN5P54829 565 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 SESN2P58004 480 aaPredicted RBP12.48□□□□□ -0.41
TPM1-209ENST00000558072 TRAF2Q12933 501 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 SKIDA1Q1XH10 827 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 TTC31Q49AM3 519 aaPredicted RBP12.48□□□□□ -0.41
TPM1-209ENST00000558072 C2orf27AQ580R0 203 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 ARSIQ5FYB1 569 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 SIRPB2Q5JXA9 342 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 CWF19L1Q69YN2 538 aaKnown RBP12.48□□□□□ -0.41
TPM1-209ENST00000558072 FBXL19Q6PCT2 694 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 CYS1Q717R9 158 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 KBTBD6Q86V97 674 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 CAND1Q86VP6 1230 aaKnown RBP12.48□□□□□ -0.41
TPM1-209ENST00000558072 CAMK1DQ8IU85 385 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 ZBED8Q8IZ13 594 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 STK40Q8N2I9 435 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 IL17RCQ8NAC3 791 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 LPCAT1Q8NF37 534 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 PIP4K2CQ8TBX8 421 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 STAMBPL1Q96FJ0 436 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 SCRN2Q96FV2 425 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 TRIB3Q96RU7 358 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 LYSMD1Q96S90 227 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 EBNA1BP2Q99848 306 aaKnown RBP12.48□□□□□ -0.41
TPM1-209ENST00000558072 HINFPQ9BQA5 517 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 GORASP1Q9BQQ3 440 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 HDAC8Q9BY41 377 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 CDH19Q9H159 772 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 EPC1Q9H2F5 836 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 LMAN1LQ9HAT1 526 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 ZC3H7BQ9UGR2 993 aaKnown RBP12.48□□□□□ -0.41
TPM1-209ENST00000558072 NCKAP1Q9Y2A7 1128 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 MAD1L1Q9Y6D9 718 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 WASF2Q9Y6W5 498 aa12.48□□□□□ -0.41
TPM1-209ENST00000558072 A0A0J9YYE9 177 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 FAM86C2PA6NEL3 165 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 FAM170BA6NMN3 283 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 KPNA3O00505 521 aaPredicted RBP12.47□□□□□ -0.41
TPM1-209ENST00000558072 TP73O15350 636 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 SLC7A4O43246 635 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 USP1O94782 785 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 IL1BP01584 269 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 TRBC1P01850 177 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 DNTTP04053 509 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 C7P10643 843 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 CHRNB1P11230 501 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 HADHAP40939 763 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 NEK3P51956 506 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 SIGLEC14Q08ET2 396 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 ARHGEF7Q14155 803 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 FRG1Q14331 258 aaKnown RBP12.47□□□□□ -0.41
TPM1-209ENST00000558072 SPARCL1Q14515 664 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 TAF1AQ15573 450 aaPredicted RBP12.47□□□□□ -0.41
TPM1-209ENST00000558072 TRADDQ15628 312 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 SPANXN3Q5MJ09 141 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 SYT13Q7L8C5 426 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 TMC3Q7Z5M5 1100 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 TTC7BQ86TV6 843 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 LMNTD2Q8IXW0 634 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 ZNF687Q8N1G0 1237 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 SLC25A41Q8N5S1 370 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 TXNDC5Q8NBS9 432 aaKnown RBP12.47□□□□□ -0.41
TPM1-209ENST00000558072 FLCNQ8NFG4 579 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms