RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 NAB1Q13506 487 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 ADGRE1Q14246 886 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 DLG2Q15700 870 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 KIAA0930Q6ICG6 404 aaPredicted RBP20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 ZNF449Q6P9G9 518 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 SH2D5Q6ZV89 423 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 AHI1Q8N157 1196 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 MDGA1Q8NFP4 955 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 OR2AP1Q8NGE2 309 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 GDAP1Q8TB36 358 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 BRSK1Q8TDC3 778 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 DNAJC1Q96KC8 554 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 ADGRE3Q9BY15 652 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 OR51F1A6NGY5 319 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 HOXC11O43248 304 aaPredicted RBP20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 IGSF6O95976 241 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 CISD3P0C7P0 127 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 PAMP19021 973 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 POLR2EP19388 210 aaKnown RBP20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 LTBRP36941 435 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 SERPINB9P50453 376 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 MPP1Q00013 466 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 Q6ZVU0 165 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 MICALL1Q8N3F8 863 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 HDAC10Q969S8 669 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 VOPP1Q96AW1 172 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 HPS4Q9NQG7 708 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 PSD3Q9NYI0 1048 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 FBXO10Q9UK96 956 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 MTCH2Q9Y6C9 303 aa20.52■□□□□ 0.88
SNRPA1-205ENST00000558036 NFATC1O95644 943 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 ALDOAP04075 364 aaKnown RBP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 CTPS1P17812 591 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 SEC24CP53992 1094 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 QPCTQ16769 361 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 CTC1Q2NKJ3 1217 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 GAB4Q2WGN9 574 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 ZNF470Q6ECI4 717 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 PARM1Q6UWI2 310 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 KIAA0907Q7Z7F0 614 aaPredicted RBP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 ZNF557Q8N988 423 aaPredicted RBP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 BANPQ8N9N5 519 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 ACVR1CQ8NER5 493 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 OR6P1Q8NGX9 317 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 FGF14Q92915 247 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 PTPRN2Q92932 1015 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 RBBP8Q99708 897 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 SLC2A11Q9BYW1 496 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 POMKQ9H5K3 350 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 ECT2Q9H8V3 914 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 HECAQ9UBI9 543 aaPredicted RBP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 PRPF4O43172 522 aaKnown RBP eCLIP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 FZD6O60353 706 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 TOP3BO95985 862 aaKnown RBP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 GABRB3P28472 473 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 SLC1A2P43004 574 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 EPHB1P54762 984 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 BCL2L1Q07817 233 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 THOC5Q13769 683 aaKnown RBP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 GLT6D1Q7Z4J2 308 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 PTAR1Q7Z6K3 402 aaPredicted RBP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 TAX1BP1Q86VP1 789 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 SFTPA1Q8IWL2 248 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 ETFBKMTQ8IXQ9 262 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 PAF1Q8N7H5 531 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 MYO19Q96H55 970 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 TBATAQ96M53 351 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 FAM161BQ96MY7 647 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 PAIP2Q9BPZ3 127 aaKnown RBP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 RPP25Q9BUL9 199 aaKnown RBP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 THG1LQ9NWX6 298 aaKnown RBP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 NKIRAS1Q9NYS0 192 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 GTSE1Q9NYZ3 720 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 ERVW-1Q9UQF0 538 aa20.51■□□□□ 0.87
SNRPA1-205ENST00000558036 TRAFD1O14545 582 aaPredicted RBP20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 TPP1O14773 563 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 ALPIP09923 528 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 IGFBP4P22692 258 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 GMPRP36959 345 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 SULT2A1Q06520 285 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 DMC1Q14565 340 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 ARMC12Q5T9G4 340 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 GRTP1Q5TC63 336 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 FSTL4Q6MZW2 842 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 NEPROQ6NW34 567 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 DPY19L3Q6ZPD9 716 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 METTL3Q86U44 580 aaKnown RBP20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 MTBPQ96DY7 904 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 SLC13A1Q9BZW2 595 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 MTG2Q9H4K7 406 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 PCMTD2Q9NV79 361 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 TRIOBPQ9H2D6 2365 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 TTC34A8MYJ7 566 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 PGLSO95336 258 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 PAPSS2O95340 614 aaPredicted RBP20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 AHSGP02765 367 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 LAMP2P13473 410 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 CCNHP51946 323 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms