RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 IRF4Q15306 451 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 ASIC2Q16515 512 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 WSCD2Q2TBF2 565 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 PPP6R3Q5H9R7 873 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 TPRG1LQ5T0D9 272 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 TMCO4Q5TGY1 634 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 PLEKHA7Q6IQ23 1121 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 APTXQ7Z2E3 356 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 GKN2Q86XP6 184 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 CAMK1DQ8IU85 385 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 SPACA3Q8IXA5 215 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 RBFAQ8N0V3 343 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 ARL14Q8N4G2 192 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 LZTR1Q8N653 840 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 NETO2Q8NC67 525 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 OR6C4Q8NGE1 309 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 TRIM11Q96F44 468 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 CRELD1Q96HD1 420 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 APOOQ9BUR5 198 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 LRRC61Q9BV99 259 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 CINPQ9BW66 212 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 SLC39A8Q9C0K1 460 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 SP110Q9HB58 689 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 PDFQ9HBH1 243 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 MRPL47Q9HD33 250 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 GULP1Q9UBP9 304 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 PCSK1NQ9UHG2 260 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 ATP8A1Q9Y2Q0 1164 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 RAI2Q9Y5P3 530 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 SCINQ9Y6U3 715 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 TMEM191CA6NGB0 347 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 DFFAO00273 331 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 ATXN7O15265 892 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 PIGNO95427 931 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 TNFP01375 233 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 ATP1A3P13637 1013 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 C6P13671 934 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 KELP23276 732 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 MLLT3P42568 568 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 TMPRSS3P57727 454 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 SRP54P61011 504 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 OGDHQ02218 1023 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 TYRO3Q06418 890 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 IL10RBQ08334 325 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 SPIDRQ14159 915 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 NFATC4Q14934 902 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 IGF2-ASQ6U949 168 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 ENPP7Q6UWV6 458 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 RFX8Q6ZV50 586 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 RD3Q7Z3Z2 195 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 SLC35F3Q8IY50 421 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 ARL10Q8N8L6 244 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 TSEN2Q8NCE0 465 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 FNIP1Q8TF40 1166 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 KCNE4Q8WWG9 221 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 SLC39A7Q92504 469 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 CELF6Q96J87 481 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 HIC2Q96JB3 615 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 SLC46A1Q96NT5 459 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 BBC3Q96PG8 261 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 BPIFA3Q9BQP9 254 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 EDEM3Q9BZQ6 932 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 TCEAL2Q9H3H9 227 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 CAAP1Q9H8G2 361 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 ZWILCHQ9H900 591 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 AIPL1Q9NZN9 384 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 PCDHGA8Q9Y5G5 932 aa13.71□□□□□ -0.21
SNRPA1-204ENST00000558020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 A0A1W2PQ67 120 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 CAPN8A6NHC0 703 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 LRRC53A6NM62 1247 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 CACNB4O00305 520 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 PDE2AO00408 941 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 TEX33O43247 280 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 BUB1BO60566 1050 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 MYBL1P10243 752 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 ERCC2P18074 760 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 MMP12P39900 470 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 CXADRP78310 365 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 KLHL30Q0D2K2 578 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 MTM1Q13496 603 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 ANO6Q4KMQ2 910 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 BOLA3Q53S33 107 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 C3orf38Q5JPI3 329 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 BBS5Q8N3I7 341 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 WDR36Q8NI36 951 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 TSACCQ96A04 125 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 ATXN7L3BQ96GX2 97 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 NAF1Q96HR8 494 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 WDR92Q96MX6 357 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 ZNF599Q96NL3 588 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 CCDC3Q9BQI4 270 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 SYT11Q9BT88 431 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 CLPBQ9H078 707 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 HSD3B7Q9H2F3 369 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 HAUS4Q9H6D7 363 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 GPATCH2LQ9NWQ4 482 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 KCTD5Q9NXV2 234 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 TAS2R14Q9NYV8 317 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms