RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 COMTP21964 271 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 DPYSQ14117 519 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 Q6ZSR6 202 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 RFX8Q6ZV50 586 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 ZSCAN30Q86W11 494 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 FAM71BQ8TC56 605 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 GRIN3AQ8TCU5 1115 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 KCNE4Q8WWG9 221 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 NAF1Q96HR8 494 aaKnown RBP16.84■□□□□ 0.29
NEK9-211ENST00000557673 APOLD1Q96LR9 279 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 TSGA10Q9BZW7 698 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 DNAJC28Q9NX36 388 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 CFAP46Q8IYW2 2715 aa16.84■□□□□ 0.29
NEK9-211ENST00000557673 MACROD2A1Z1Q3 448 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 GRID2IPA4D2P6 1211 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 WASH4PA8MWX3 477 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 H3BM21 787 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 H3BRJ5 948 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 PSTPIP1O43586 416 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 RAMP2O60895 175 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 CSO75390 466 aaKnown RBP16.83■□□□□ 0.28
NEK9-211ENST00000557673 ARSEP51690 589 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 RPS21P63220 83 aaKnown RBP16.83■□□□□ 0.28
NEK9-211ENST00000557673 LRRC38Q5VT99 294 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 KIAA1161Q6NSJ0 714 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 DPY19L3Q6ZPD9 716 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 PTAR1Q7Z6K3 402 aaPredicted RBP16.83■□□□□ 0.28
NEK9-211ENST00000557673 DAAM2Q86T65 1068 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 LRRC57Q8N9N7 239 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 MAPK15Q8TD08 544 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 ARHGEF2Q92974 986 aaKnown RBP16.83■□□□□ 0.28
NEK9-211ENST00000557673 ARRDC3Q96B67 414 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 FEM1CQ96JP0 617 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 CSPG4P5Q96PW8 444 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 CATSPERBQ9H7T0 1116 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 FZD3Q9NPG1 666 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 CWC15Q9P013 229 aaKnown RBP16.83■□□□□ 0.28
NEK9-211ENST00000557673 RCOR3Q9P2K3 495 aaPredicted RBP16.83■□□□□ 0.28
NEK9-211ENST00000557673 IL36AQ9UHA7 158 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 FCF1Q9Y324 198 aaKnown RBP16.83■□□□□ 0.28
NEK9-211ENST00000557673 CSNK1G3Q9Y6M4 447 aa16.83■□□□□ 0.28
NEK9-211ENST00000557673 K7ESM1 405 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 CD160O95971 181 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 CD48P09326 243 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 GIMD1P0DJR0 217 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 ETFBP38117 255 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 ARL4AP40617 200 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 HCAR3P49019 387 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 DNA2P51530 1060 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 NEK3P51956 506 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 CDH6P55285 790 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 CLDN2P57739 230 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 SLC20A2Q08357 652 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 DPYSL3Q14195 570 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 KRT81Q14533 505 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 IFI16Q16666 785 aaKnown RBP16.82■□□□□ 0.28
NEK9-211ENST00000557673 ATP13A4Q4VNC1 1196 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 TMEM259Q4ZIN3 620 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 ZCCHC8Q6NZY4 707 aaKnown RBP16.82■□□□□ 0.28
NEK9-211ENST00000557673 IGF2-ASQ6U949 168 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 LEKR1Q6ZMV7 388 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 GCNT7Q6ZNI0 430 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 ZNF662Q6ZS27 426 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 RHOT1Q8IXI2 618 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 CCDC97Q96F63 343 aaPredicted RBP16.82■□□□□ 0.28
NEK9-211ENST00000557673 ZNF670Q9BS34 389 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 SLC17A9Q9BYT1 436 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 CEP44Q9C0F1 390 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 MAGEH1Q9H213 219 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 IPO11Q9UI26 975 aaKnown RBP16.82■□□□□ 0.28
NEK9-211ENST00000557673 ZFR2Q9UPR6 939 aaKnown RBP16.82■□□□□ 0.28
NEK9-211ENST00000557673 PPP2R2CQ9Y2T4 447 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 ALG6Q9Y672 507 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 CAPN6Q9Y6Q1 641 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 DOCK9Q9BZ29 2069 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 MGAQ8IWI9 3026 aa16.82■□□□□ 0.28
NEK9-211ENST00000557673 J3QKU1 62 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 KLK10O43240 276 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 KRT86O43790 486 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 LZTS3O60299 673 aaPredicted RBP16.81■□□□□ 0.28
NEK9-211ENST00000557673 LEFTY1O75610 366 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 CSF2P04141 144 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 KRT1P04264 644 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 RBMS1P29558 406 aaKnown RBP16.81■□□□□ 0.28
NEK9-211ENST00000557673 RABIFP47224 123 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 MARCKSL1P49006 195 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 NAP1L1P55209 391 aaKnown RBP16.81■□□□□ 0.28
NEK9-211ENST00000557673 POLD3Q15054 466 aaPredicted RBP16.81■□□□□ 0.28
NEK9-211ENST00000557673 ARSIQ5FYB1 569 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 ARHGAP40Q5TG30 622 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 SEL1L3Q68CR1 1132 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 KYAT3Q6YP21 454 aaKnown RBP16.81■□□□□ 0.28
NEK9-211ENST00000557673 PARGQ86W56 976 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 SLC22A18ASQ8N1D0 253 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 PCDH20Q8N6Y1 951 aaKnown RBP16.81■□□□□ 0.28
NEK9-211ENST00000557673 IFI44Q8TCB0 444 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 TM6SF2Q9BZW4 377 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 NOL6Q9H6R4 1146 aaKnown RBP16.81■□□□□ 0.28
NEK9-211ENST00000557673 WASF2Q9Y6W5 498 aa16.81■□□□□ 0.28
NEK9-211ENST00000557673 SPTY2D1-AS1A0A0U1RR47 76 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms