RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TOP6BLQ8N6T0 577 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 SHCBP1Q8NEM2 672 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 DPF3Q92784 378 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 C12orf43Q96C57 262 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 PGAP3Q96FM1 320 aaPredicted RBP11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 FICDQ9BVA6 458 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 HIPK3Q9H422 1215 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 TNFRSF12AQ9NP84 129 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 SMOXQ9NWM0 555 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 ARHGEF38Q9NXL2 777 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 OR12D3Q9UGF7 316 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 FBXO5Q9UKT4 447 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 CSADQ9Y600 493 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 AQP12BA6NM10 295 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 BBIP1A8MTZ0 92 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 H3BRB1 525 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 F9P00740 461 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 RBP1P09455 135 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 IL10P22301 178 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 KCNA5P22460 613 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 TMEM62Q0P6H9 643 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 BTBD8Q5XKL5 378 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 RWDD4Q6NW29 188 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 RNF135Q8IUD6 432 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 SLC22A9Q8IVM8 553 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 AQP12AQ8IXF9 295 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 SNX31Q8N9S9 440 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 OR9I1Q8NGQ6 314 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 FCRL5Q96RD9 977 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 C16orf70Q9BSU1 422 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 ADI1Q9BV57 179 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 COLEC11Q9BWP8 271 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 TUT1Q9H6E5 874 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 WDCPQ9H6R7 721 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 KLK14Q9P0G3 267 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 AURKCQ9UQB9 309 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 TRAF6Q9Y4K3 522 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 SNX10Q9Y5X0 201 aa11.89□□□□□ -0.51
VIPAS39-211ENST00000557658 LRIG2O94898 1065 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 MT-CYBP00156 380 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 LTA4HP09960 611 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 HMOX2P30519 316 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 TTKP33981 857 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 MERTKQ12866 999 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 PITRM1Q5JRX3 1037 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 MARCH8Q5T0T0 291 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 KIAA0930Q6ICG6 404 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 PRMT9Q6P2P2 845 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 SLC39A3Q9BRY0 314 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 TRMOQ9BU70 441 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 C9orf16Q9BUW7 83 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 RBPJLQ9UBG7 517 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 SLC2A6Q9UGQ3 507 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 CDH7Q9ULB5 785 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 PAPPA2Q9BXP8 1791 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 MYLKQ15746 1914 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 ZNF236Q9UL36 1845 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 DHRS12A0PJE2 317 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 UNCXA6NJT0 531 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 FZD9O00144 591 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 YWHAQP27348 245 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 RPL10P27635 214 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 TPP2P29144 1249 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 MAGEA8P43361 318 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 GEMP55040 296 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 DENND5AQ6IQ26 1287 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 ZNF280DQ6N043 979 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 NEPROQ6NW34 567 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 KIAA0408Q6ZU52 694 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 LARP4Q71RC2 724 aaKnown RBP eCLIP11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 RPS27LQ71UM5 84 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 SULF1Q8IWU6 871 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 HOPXQ9BPY8 73 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 DCUN1D5Q9BTE7 237 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 TKTL2Q9H0I9 626 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 ADAMTS10Q9H324 1103 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 GOLGA2P5Q9HBQ8 144 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 GLOD4Q9HC38 313 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 CNGB3Q9NQW8 809 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 TBC1D23Q9NUY8 699 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 SH3GLB1Q9Y371 365 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 TLL2Q9Y6L7 1015 aa11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 POLR2AP24928 1970 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-211ENST00000557658 A0A0G2JLL6 359 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 RNF103-CHMP3A0A140T963 221 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 GIPC1O14908 333 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 GNAO1P09471 354 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 CCNCP24863 283 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 FASP25445 335 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 PSMA4P25789 261 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 PLK1P53350 603 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 RAB15P59190 212 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 LILRA4P59901 499 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 ATP6V0D1P61421 351 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 EML3Q32P44 896 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 RBM20Q5T481 1227 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 DCLRE1AQ6PJP8 1040 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 PRRT2Q7Z6L0 340 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 TERB1Q8NA31 727 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 GOLM1Q8NBJ4 401 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms