RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PPP1R9BQ96SB3 815 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 PSMB7Q99436 277 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 KLF6Q99612 283 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 IL12RB2Q99665 862 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 CCDC3Q9BQI4 270 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 TRIM62Q9BVG3 475 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 BOCQ9BWV1 1114 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 HDAC8Q9BY41 377 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SLC17A9Q9BYT1 436 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 MUC3BQ9H195 1237 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 TNKS2Q9H2K2 1166 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 TCEAL2Q9H3H9 227 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SYNDIG1Q9H7V2 258 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 FAM204AQ9H8W3 233 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 DYRK4Q9NR20 520 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 DDIT4Q9NX09 232 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 GOLGA6AQ9NYA3 693 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 COX16Q9P0S2 106 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SLC12A6Q9UHW9 1150 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 VPS51Q9UID3 782 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SALL4Q9UJQ4 1053 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 CFAP45Q9UL16 551 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 VANGL2Q9ULK5 521 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 PNMA8BQ9ULN7 279 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF232Q9UNY5 417 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 TBC1D30Q9Y2I9 924 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 HS3ST4Q9Y661 456 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 HS3ST3A1Q9Y663 406 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 RELNP78509 3460 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 MYO9AB2RTY4 2548 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SPTAN1Q13813 2472 aaKnown RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 USP9XQ93008 2570 aaPredicted RBP5.95□□□□□ -1.46
VPS33B-207ENST00000557470 TRIM49BA6NDI0 452 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 NTN3O00634 580 aaPredicted RBP5.95□□□□□ -1.46
VPS33B-207ENST00000557470 TPP1O14773 563 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 PLD2O14939 933 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 AKAP10O43572 662 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 CLDN11O75508 207 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 LEFTY1O75610 366 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 CNTN5O94779 1100 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ENDOD1O94919 500 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 GJB6O95452 261 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ARAFP10398 606 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 SLC2A3P11169 496 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ADRB3P13945 408 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 HGFP14210 728 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 AMPD1P23109 780 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ITGB7P26010 798 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 GSTT1P30711 240 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 UGT1A5P35504 534 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 PRCPP42785 496 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ACADSBP45954 432 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 FMO5P49326 533 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 NEK2P51955 445 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 NEK3P51956 506 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 RPS21P63220 83 aaKnown RBP5.95□□□□□ -1.46
VPS33B-207ENST00000557470 KRT83P78385 493 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 CDK17Q00537 523 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 FKBP3Q00688 224 aaKnown RBP5.95□□□□□ -1.46
VPS33B-207ENST00000557470 C1orf61Q13536 156 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 SPIDRQ14159 915 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 FXNQ16595 210 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ALFQ53S48 1182 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 PRRT3Q5FWE3 981 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ACBD5Q5T8D3 534 aaPredicted RBP5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ANKRD40Q6AI12 368 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 KIAA1161Q6NSJ0 714 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF574Q6ZN55 896 aaPredicted RBP5.95□□□□□ -1.46
VPS33B-207ENST00000557470 DPY19L3Q6ZPD9 716 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 USP53Q70EK8 1073 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 TMEM110Q86TL2 294 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ARHGEF19Q8IW93 802 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 FAM169BQ8N8A8 192 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 MYRIPQ8NFW9 859 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 WDR48Q8TAF3 677 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 LMO3Q8TAP4 145 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 NAT6Q93015 286 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 LIN37Q96GY3 246 aaPredicted RBP5.95□□□□□ -1.46
VPS33B-207ENST00000557470 PPP1R16AQ96I34 528 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 FEM1CQ96JP0 617 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 BTBD6Q96KE9 485 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 PPP1R13BQ96KQ4 1090 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 CCDC114Q96M63 670 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 SLC2A13Q96QE2 648 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 MED15Q96RN5 788 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 LRRC61Q9BV99 259 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 FOXP3Q9BZS1 431 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 GOLPH3LQ9H4A5 285 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 SUV39H2Q9H5I1 410 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 EPB41L5Q9HCM4 733 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ANKMY1Q9P2S6 941 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 SPASTQ9UBP0 616 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 APOBEC3BQ9UH17 382 aaKnown RBP5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ARMCX3Q9UH62 379 aaPredicted RBP5.95□□□□□ -1.46
VPS33B-207ENST00000557470 IL36AQ9UHA7 158 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 PFDN2Q9UHV9 154 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 IPO11Q9UI26 975 aaKnown RBP5.95□□□□□ -1.46
VPS33B-207ENST00000557470 ACSL6Q9UKU0 697 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 MKL2Q9ULH7 1088 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms